RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 BMFQ96LC9 184 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 KCTD15Q96SI1 283 aaPredicted RBP12.33□□□□□ -0.44
LSM2-208ENST00000375661 PSMB7Q99436 277 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 SEMA4CQ9C0C4 833 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 MUC3BQ9H195 1237 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 FZD3Q9NPG1 666 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 DNAJC28Q9NX36 388 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.44
LSM2-208ENST00000375661 ZNF212Q9UDV6 495 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 IL36AQ9UHA7 158 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 AP4E1Q9UPM8 1137 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 ENTPD2Q9Y5L3 495 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
LSM2-208ENST00000375661 KIF26BQ2KJY2 2108 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 RP1P56715 2156 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CDRT15L2A8MXV6 281 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 AP1G1O43747 822 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 RHOCP08134 193 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CCDC175P0C221 793 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 COMTP21964 271 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 TGM2P21980 687 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 SLC1A1P43005 524 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 SSR1P43307 286 aaKnown RBP12.32□□□□□ -0.44
LSM2-208ENST00000375661 RECQLP46063 649 aaPredicted RBP12.32□□□□□ -0.44
LSM2-208ENST00000375661 ARSEP51690 589 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 NEK3P51956 506 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CLDN2P57739 230 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 KCNC4Q03721 635 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 FZD2Q14332 565 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 DPYSL2Q16555 572 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 SMTNL2Q2TAL5 461 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 C11orf63Q6NUN7 778 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 XKR5Q6UX68 686 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 LRRC31Q6UY01 552 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CLEC14AQ86T13 490 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 PSTKQ8IV42 348 aaKnown RBP12.32□□□□□ -0.44
LSM2-208ENST00000375661 TXLNBQ8N3L3 684 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 TEKT4Q8WW24 435 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 GLMNQ92990 594 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 TBATAQ96M53 351 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 SLC17A9Q9BYT1 436 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CEP44Q9C0F1 390 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 DHX35Q9H5Z1 703 aaKnown RBP12.32□□□□□ -0.44
LSM2-208ENST00000375661 MPP6Q9NZW5 540 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 PPP2R2CQ9Y2T4 447 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
LSM2-208ENST00000375661 CHD5Q8TDI0 1954 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 MACROD2A1Z1Q3 448 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 AQP9O43315 295 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 NEBLO76041 1014 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 WISP1O95388 367 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 MT-CO1P00395 513 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 ADRB3P13945 408 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 ITGB7P26010 798 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 RPIAP49247 311 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 NAP1L1P55209 391 aaKnown RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 SLC20A2Q08357 652 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 NR0B2Q15466 257 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 CDKN3Q16667 212 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 HADHQ16836 314 aaKnown RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 ARSIQ5FYB1 569 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 SEL1L3Q68CR1 1132 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 C22orf39Q6P5X5 142 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 ZNF783Q6ZMS7 281 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 CCDC81Q6ZN84 652 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 EFL1Q7Z2Z2 1120 aaKnown RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 NLRP14Q86W24 1093 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 LRRC57Q8N9N7 239 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 WDR36Q8NI36 951 aaKnown RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 FAM71BQ8TC56 605 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 ASB12Q8WXK4 309 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 HSPH1Q92598 858 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 NAT6Q93015 286 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 TBC1D31Q96DN5 1066 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 PRR11Q96HE9 360 aaPredicted RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 CALR3Q96L12 384 aaKnown RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 LENG8Q96PV6 779 aaPredicted RBP12.31□□□□□ -0.44
LSM2-208ENST00000375661 ZYG11BQ9C0D3 744 aa12.31□□□□□ -0.44
LSM2-208ENST00000375661 CXorf51AA0A1B0GTR3 108 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 CPED1A4D0V7 1026 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 POM121BA6NF01 834 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 K7ERQ8 282 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 FPGTO14772 594 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 SMAD6O43541 496 aaKnown RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 CREB3O43889 395 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 SNAP91O60641 907 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 LEFTY1O75610 366 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
LSM2-208ENST00000375661 CD48P09326 243 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 MYF5P13349 255 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 RHOQP17081 205 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 IL4RP24394 825 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 GJC1P36383 396 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 FGL2Q14314 439 aa12.3□□□□□ -0.44
LSM2-208ENST00000375661 ZNF542PQ5EBM4 170 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms