RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
UBR4-203ENST00000375225 ATP13A1Q9HD20 1204 aa12.32□□□□□ -0.44
UBR4-203ENST00000375225 PDP2Q9P2J9 529 aa12.32□□□□□ -0.44
UBR4-203ENST00000375225 KIAA0100Q14667 2235 aaKnown RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 IGLV3-10A0A075B6K4 115 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 CCDC78A2IDD5 438 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 TARM1B6A8C7 271 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 PFDN6O15212 129 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 DLX3O60479 287 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 B4GALT3O60512 393 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 SMIM24O75264 130 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 UPP2O95045 317 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 FGF1P05230 155 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 PBX3P40426 434 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 GLRBP48167 497 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 TAS2R39P59534 338 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 POLD3Q15054 466 aaPredicted RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 PCSK7Q16549 785 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 LSM12Q3MHD2 195 aaKnown RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 MS4A13Q5J8X5 152 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 PIK3R6Q5UE93 754 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 MRNIPQ6NTE8 343 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 TMEM154Q6P9G4 183 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 BNC2Q6ZN30 1099 aaPredicted RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 DENND6AQ8IWF6 608 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 PGAM4Q8N0Y7 254 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 FBXO27Q8NI29 283 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 PABPC5Q96DU9 382 aaKnown RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 CLPTM1LQ96KA5 538 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 ECSITQ9BQ95 431 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 Q9H521 79 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 POMKQ9H5K3 350 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 POPDC3Q9HBV1 291 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 IL37Q9NZH6 218 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 MPP6Q9NZW5 540 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 C6orf203Q9P0P8 240 aaPredicted RBP12.31□□□□□ -0.44
UBR4-203ENST00000375225 GMIPQ9P107 970 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 STK39Q9UEW8 545 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 RIMKLBQ9ULI2 386 aa12.31□□□□□ -0.44
UBR4-203ENST00000375225 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 CARNS1A5YM72 827 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 TRIM43BA6NCK2 446 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 A6NHS1 94 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 DRGXA6NNA5 263 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 KRT34O76011 436 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 BAIAP3O94812 1187 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 IPO13O94829 963 aaKnown RBP12.3□□□□□ -0.44
UBR4-203ENST00000375225 STAMBPO95630 424 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 EPOP01588 193 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 PDHA1P08559 390 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 CSF2RAP15509 400 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 GABRB3P28472 473 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 ARRB2P32121 409 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 CD86P42081 329 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 GATMP50440 423 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 NUDT2P50583 147 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 PFKPQ01813 784 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 EFEMP1Q12805 493 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 STX5Q13190 355 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 ZNF235Q14590 738 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 VARS2Q5ST30 1063 aaKnown RBP12.3□□□□□ -0.44
UBR4-203ENST00000375225 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBR4-203ENST00000375225 FRMD7Q6ZUT3 714 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 C14orf80Q86SX3 495 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 MFN1Q8IWA4 741 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 SLC25A41Q8N5S1 370 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 NRG4Q8WWG1 115 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 TRIM43Q96BQ3 446 aaPredicted RBP12.3□□□□□ -0.44
UBR4-203ENST00000375225 FAM136AQ96C01 138 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 SPDL1Q96EA4 605 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 HMCESQ96FZ2 354 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 FEM1CQ96JP0 617 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 LENG8Q96PV6 779 aaPredicted RBP12.3□□□□□ -0.44
UBR4-203ENST00000375225 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 KLHL4Q9C0H6 718 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 MAN1C1Q9NR34 630 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 POMPQ9Y244 141 aa12.3□□□□□ -0.44
UBR4-203ENST00000375225 NYNRINQ9P2P1 1898 aaKnown RBP12.3□□□□□ -0.44
UBR4-203ENST00000375225 FAM92AA1XBS5 289 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 F8W810 466 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 NEMP1O14524 444 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 GRID2O43424 1007 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 PEX1O43933 1283 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 CHRNGP07510 517 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 CES1P23141 567 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 ARNTP27540 789 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 SLC11A1P49279 550 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 ALDH7A1P49419 539 aaKnown RBP12.29□□□□□ -0.44
UBR4-203ENST00000375225 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.444e-8■□□□□ 11.2
UBR4-203ENST00000375225 CSHL1Q14406 222 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 SQLEQ14534 574 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 TECRLQ5HYJ1 363 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 RALGPS1Q5JS13 557 aa12.29□□□□□ -0.44
UBR4-203ENST00000375225 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms