RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 TSNAXIP1Q2TAA8 658 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CENPLQ8N0S6 344 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MAB21L3Q8N8X9 362 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PHOSPHO2Q8TCD6 241 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 BLOC1S5Q8TDH9 187 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SREK1Q8WXA9 508 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HDAC10Q969S8 669 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ASAH2Q9NR71 780 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FBXO6Q9NRD1 293 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 LHX3Q9UBR4 397 aa18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MKI67P46013 3256 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-201ENST00000374943 C2orf71A6NGG8 1288 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SNAP91O60641 907 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PRLP01236 227 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MYL2P10916 166 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 BMPR1AP36894 532 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 PRKAA2P54646 552 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TAS2R39P59534 338 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ERVFC1P60507 584 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CDH18Q13634 790 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FAM91A1Q658Y4 838 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZYG11AQ6WRX3 759 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ASRGL1Q7L266 308 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARID3BQ8IVW6 561 aaPredicted RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CEP97Q8IW35 865 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMEM151AQ8N4L1 468 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HERVK_113Q902F9 699 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ELMO2Q96JJ3 720 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 OMDQ99983 421 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TASP1Q9H6P5 420 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZNF395Q9H8N7 513 aaPredicted RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SAR1AQ9NR31 198 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CFAP97Q9P2B7 532 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZFP69BQ9UJL9 534 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 VPS28Q9UK41 221 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CORO1CQ9ULV4 474 aaPredicted RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TMEM114B3SHH9 223 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 AURKAO14965 403 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 KLHL2O95198 593 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CRTAMO95727 393 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 FGF19O95750 216 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CSKP41240 450 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZNF140P52738 457 aaPredicted RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 EPHA5P54756 1037 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 CLNKQ7Z7G1 428 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MTDHQ86UE4 582 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GPATCH11Q8N954 259 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 MRPL43Q8N983 215 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 OR6P1Q8NGX9 317 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SCG3Q8WXD2 468 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 TSPAN17Q96FV3 270 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 DNAJC1Q96KC8 554 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 EXOC2Q96KP1 924 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 GPR78Q96P69 363 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 STN1Q9H668 368 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 HEY2Q9UBP5 337 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 VPS51Q9UID3 782 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 KCTD3Q9Y597 815 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ARL5AQ9Y689 179 aa18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 ZNF106Q9H2Y7 1883 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-201ENST00000374943 SCN8AQ9UQD0 1980 aa18.08■□□□□ 0.49
HLA-DQB1-201ENST00000374943 A0A1W2PRU2 124 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TARM1B6A8C7 271 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ITM2AO43736 263 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RASSF9O75901 435 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 S1PR4O95977 384 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HOXB8P17481 243 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OGNP20774 298 aaKnown RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SAT1P21673 171 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CTNNB1P35222 781 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KPNA2P52292 529 aaKnown RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC12A2P55011 1212 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ABCE1P61221 599 aaKnown RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ITGA9Q13797 1035 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 MPPE1Q53F39 396 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LRRC8EQ6NSJ5 796 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NCEH1Q6PIU2 408 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PTAR1Q7Z6K3 402 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TDRD5Q8NAT2 981 aaKnown RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 PIWIL2Q8TC59 973 aaKnown RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 WFDC5Q8TCV5 224 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 KCTD4Q8WVF5 259 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 TBATAQ96M53 351 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SORT1Q99523 831 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 WWP1Q9H0M0 922 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 FAM96AQ9H5X1 160 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC40A1Q9NP59 571 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NLE1Q9NVX2 485 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 OXSMQ9NWU1 459 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 ARHGAP26Q9UNA1 814 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RWDD3Q9Y3V2 267 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 RAI2Q9Y5P3 530 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SLC4A7Q9Y6M7 1214 aa18.08■□□□□ 0.48
HLA-DQB1-201ENST00000374943 CXorf51AA0A1B0GTR3 108 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 NRG2O14511 850 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 SCAMP3O14828 347 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-201ENST00000374943 HGSO14964 777 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms