RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 NRP2O60462 931 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 GABBR2O75899 941 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 INPP5AQ14642 412 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 PPP1R3AQ16821 1122 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 FAM45BPQ6NSW5 357 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 FAM45AQ8TCE6 357 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 SCYL1Q96KG9 808 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 ADNPQ9H2P0 1102 aa20.7■□□□□ 0.9
TMEFF1-201ENST00000374879 POLBP06746 335 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 PHC1P78364 1004 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 PIGFQ07326 219 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 PRPSAP1Q14558 356 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 CTF1Q16619 201 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 MFSD3Q96ES6 412 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 PIWIL1Q96J94 861 aaKnown RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 RPL10LQ96L21 214 aaKnown RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 TEPSINQ96N21 525 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 SH3GL1Q99961 368 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 TARS2Q9BW92 718 aaKnown RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 POLR3FQ9H1D9 316 aaPredicted RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 IL1RL2Q9HB29 575 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 PDLIM7Q9NR12 457 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 CCDC78A2IDD5 438 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 DEAF1O75398 565 aaPredicted RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 CABYRO75952 493 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 KCNA2P16389 499 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 SAT1P21673 171 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 GSTM2P28161 218 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 RAP1GAPP47736 663 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 SIGIRRQ6IA17 410 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 TBPL2Q6SJ96 375 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 R3HCC1LQ7Z5L2 792 aaKnown RBP20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 LRRC49Q8IUZ0 686 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 ADGRG5Q8IZF4 528 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 CEP41Q9BYV8 373 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 CHRAC1Q9NRG0 131 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 GPSM3Q9Y4H4 160 aa20.69■□□□□ 0.9
TMEFF1-201ENST00000374879 WDR81Q562E7 1941 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 AQP12BA6NM10 295 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 TRPC5OSA6NMA1 111 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 H0Y858 1186 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 M0QX08 132 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 NME4O00746 187 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 PSAPP07602 524 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 CDH1P12830 882 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 CLK3P49761 638 aaKnown RBP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 PRKCEQ02156 737 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 TMC5Q6UXY8 1006 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 DCP2Q8IU60 420 aaKnown RBP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 AQP12AQ8IXF9 295 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 REM2Q8IYK8 340 aaPredicted RBP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 MAGED4Q96JG8 741 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 MYRFLQ96LU7 910 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 TLR9Q9NR96 1032 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 RGS20O76081 388 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 CDC20Q12834 499 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 OLIG2Q13516 323 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 SQLEQ14534 574 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 WDR45BQ5MNZ6 344 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 HEATR6Q6AI08 1181 aaKnown RBP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 XRRA1Q6P2D8 792 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 COLGALT1Q8NBJ5 622 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 EMILIN2Q9BXX0 1053 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 ING2Q9H160 280 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 JPH1Q9HDC5 661 aaPredicted RBP20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 MID2Q9UJV3 735 aa20.68■□□□□ 0.9
TMEFF1-201ENST00000374879 LOC105371267A0A1B0GV96 52 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 C2CD4BA6NLJ0 364 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 UBDO15205 165 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 RFPL2O75678 378 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 TNFSF9P41273 254 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 ECT2LQ008S8 904 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 MTERF2Q49AM1 385 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 BTBD8Q5XKL5 378 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 ERO1BQ86YB8 467 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CPB2Q96IY4 423 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 BTN2A3PQ96KV6 586 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 MAGEB5Q9BZ81 275 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 DNAI2Q9GZS0 605 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CPNE5Q9HCH3 593 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CNGB3Q9NQW8 809 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 SLCO3A1Q9UIG8 710 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 TNPO2O14787 897 aaKnown RBP20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 DLX3O60479 287 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 EGFRP00533 1210 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CRHBPP24387 322 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CYP2F1P24903 491 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 ASPAP45381 313 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 SLC12A1Q13621 1099 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 FAM35AQ86V20 835 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 BPHLQ86WA6 291 aaPredicted RBP20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 TRPV3Q8NET8 790 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 CEP295NLQ96MC4 621 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 SNRNP25Q9BV90 132 aaKnown RBP20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 ALOXE3Q9BYJ1 711 aa20.67■□□□□ 0.9
TMEFF1-201ENST00000374879 NGRNQ9NPE2 291 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms