RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 PRAMEF26H0Y7S4 382 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 RIOK3O14730 519 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MMP20O60882 483 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PAK4O96013 591 aaPredicted RBP21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CD38P28907 300 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 POLR2LP62875 67 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ELP6Q0PNE2 266 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 GRIK2Q13002 908 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PAF1Q8N7H5 531 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PDCD6IPQ8WUM4 868 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 GTPBP2Q9BX10 602 aaKnown RBP21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CA5BQ9Y2D0 317 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 RAI2Q9Y5P3 530 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CEP192Q8TEP8 1941 aa21.14■□□□□ 0.97
MAP1LC3A-202ENST00000374837 A0A1W2PQ67 120 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 C4orf47A7E2U8 309 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TJP3O95049 919 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 LIMK1P53667 647 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ATXN3P54252 364 aaPredicted RBP21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SEMG2Q02383 582 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 STAT4Q14765 748 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 NOMO1Q15155 1222 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 KIF19Q2TAC6 998 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TEX44Q53QW1 395 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MEI1Q5TIA1 1274 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ERAP2Q6P179 960 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ADAT2Q7Z6V5 191 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ZSCAN30Q86W11 494 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 OR2I1PQ8NGU4 316 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ACTL9Q8TC94 416 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CXorf40AQ8TE69 158 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SPOCK2Q92563 424 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 AGAP3Q96P47 875 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ALS2CR12Q96Q35 445 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MYOCQ99972 504 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 WRAP53Q9BUR4 548 aaKnown RBP21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ZDHHC5Q9C0B5 715 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 FZD3Q9NPG1 666 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TMEM9BQ9NQ34 198 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ANKRD6Q9Y2G4 727 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PCDHB9Q9Y5E1 797 aa21.13■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SPTBN2O15020 2390 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 HACD1B0YJ81 288 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 VILLO15195 856 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PGLSO95336 258 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 HNRNPA2B1P22626 353 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PTPN3P26045 913 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 AKT2P31751 481 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 FAM193AP78312 1265 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 OTUD4Q01804 1114 aaKnown RBP21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 WASHC5Q12768 1159 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SGCGQ13326 291 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 XRCC4Q13426 336 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 RPS6KA1Q15418 735 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ARMC12Q5T9G4 340 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TMEM145Q8NBT3 493 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ASB12Q8WXK4 309 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 QKIQ96PU8 341 aaKnown RBP eCLIP21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PHTF1Q9UMS5 762 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SNX11Q9Y5W9 270 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ACACBO00763 2458 aa21.12■□□□□ 0.97
MAP1LC3A-202ENST00000374837 H7C0C1 242 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 RAD51BO15315 384 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 FZD6O60353 706 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CPP00450 1065 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MMP2P08253 660 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PDHA1P08559 390 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MMP12P39900 470 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 ATP5OP48047 213 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 C21orf59P57076 290 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SKOR1P84550 965 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SLC45A4Q5BKX6 768 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 REXO1L1PQ8IX06 675 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MINDY1Q8N5J2 469 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MFSD2AQ8NA29 543 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 PIH1D2Q8WWB5 315 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SKA1Q96BD8 255 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TEKT5Q96M29 485 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 FAM118BQ9BPY3 351 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 C10orf88Q9H8K7 445 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CDV3Q9UKY7 258 aaKnown RBP21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 HS3ST3A1Q9Y663 406 aa21.11■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TLR4O00206 839 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SLC30A4O14863 429 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 MTSS1O43312 755 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TM7SF2O76062 418 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CD86P42081 329 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CTSKP43235 329 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 CLDN2P57739 230 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 EIF3EP60228 445 aaKnown RBP21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 RALGDSQ12967 914 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 HLA-BQ31612 363 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 IL27RAQ6UWB1 636 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 DPPA4Q7L190 304 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 TRIM58Q8NG06 486 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 HTR3CQ8WXA8 447 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 LENG8Q96PV6 779 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 KLF6Q99612 283 aaPredicted RBP21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 SLC25A51Q9H1U9 297 aa21.1■□□□□ 0.97
MAP1LC3A-202ENST00000374837 GLOD4Q9HC38 313 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms