RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PRPSAP1Q14558 356 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 ELF2Q15723 593 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3GQ6DHY5 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3CQ6IPX1 549 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TTC27Q6P3X3 843 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 KDELC1Q6UW63 502 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 C4orf22Q6V702 233 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 ARHGEF18Q6ZSZ5 1173 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TRIM69Q86WT6 500 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TBC1D3Q8IZP1 549 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 NDUFAF2Q8N183 169 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PDCD6IPQ8WUM4 868 aaKnown RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 LOXL4Q96JB6 756 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 FEM1CQ96JP0 617 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 MCCC1Q96RQ3 725 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TRIB3Q96RU7 358 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 C6orf106Q9H6K1 298 aaPredicted RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PCDH9Q9HC56 1237 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PCDH12Q9NPG4 1184 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 CHKBQ9Y259 395 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 AAR2Q9Y312 384 aaKnown RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 VPS13AQ96RL7 3174 aa11.44□□□□□ -0.58
HSPG2-202ENST00000374676 TNRC6BQ9UPQ9 1833 aaKnown RBP11.44□□□□□ -0.58
HSPG2-202ENST00000374676 PIEZO1Q92508 2521 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 LOC285095A0A1B0GVY8 99 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ANKRD66B4E2M5 251 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PROB1E7EW31 1015 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 CCDC188H7C350 402 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PSMD3O43242 534 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 SPINT1O43278 529 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 RNGTTO60942 597 aaKnown RBP11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PMPCBO75439 489 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 METTL18O95568 372 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 IFNB1P01574 187 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 TRBC1P01850 177 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ITIH2P19823 946 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PSMB4P28070 264 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 NUDT1P36639 197 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 FDFT1P37268 417 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 WNT3AP56704 352 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 TUBB2AQ13885 445 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 KIAA0895LQ68EN5 471 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 KIAA1161Q6NSJ0 714 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ERAP2Q6P179 960 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 CCDC137Q6PK04 289 aaKnown RBP11.43□□□□□ -0.58
HSPG2-202ENST00000374676 DPPA4Q7L190 304 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 HORMAD1Q86X24 394 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 SLC41A1Q8IVJ1 513 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 TMEFF1Q8IYR6 380 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PAF1Q8N7H5 531 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 CCDC89Q8N998 374 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 SUMF1Q8NBK3 374 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ASB12Q8WXK4 309 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 DNASE2BQ8WZ79 361 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 GORASP1Q9BQQ3 440 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 MLPHQ9BV36 600 aaPredicted RBP11.43□□□□□ -0.58
HSPG2-202ENST00000374676 TUBB2BQ9BVA1 445 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ADGRE3Q9BY15 652 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 UBP1Q9NZI7 540 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PAK5Q9P286 719 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 RAB23Q9ULC3 237 aa11.43□□□□□ -0.58
HSPG2-202ENST00000374676 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.43□□□□□ -0.58
HSPG2-202ENST00000374676 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
HSPG2-202ENST00000374676 A0A1W2PQU0 124 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GOLGA6CA6NDK9 693 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GOLGA6BA6NDN3 693 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 FAM47DPA6NHR8 397 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 ERI2A8K979 691 aaKnown RBP11.42□□□□□ -0.58
HSPG2-202ENST00000374676 NEMP1O14524 444 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 LATO43561 262 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 PCDH8O95206 1070 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 NDST3O95803 873 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 IGHV4-34P06331 123 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GOLGA6DP0CG33 693 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 CYP2A6P11509 494 aaPredicted RBP11.42□□□□□ -0.58
HSPG2-202ENST00000374676 ETS1P14921 441 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 RPL22P35268 128 aaKnown RBP11.42□□□□□ -0.58
HSPG2-202ENST00000374676 MMP12P39900 470 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 DPP6P42658 865 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GRIA4P48058 902 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 EPHB1P54762 984 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 RPS21P63220 83 aaKnown RBP11.42□□□□□ -0.58
HSPG2-202ENST00000374676 FAM193AP78312 1265 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 QPCTQ16769 361 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 TMEM259Q4ZIN3 620 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 WDR45BQ5MNZ6 344 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 KCTD11Q693B1 232 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 CCDC70Q6NSX1 233 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 RANBP10Q6VN20 620 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 PRR23BQ6ZRT6 265 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GSTA5Q7RTV2 222 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 CBARPQ8N350 705 aaPredicted RBP11.42□□□□□ -0.58
HSPG2-202ENST00000374676 GLIS1Q8NBF1 620 aa11.42□□□□□ -0.58
HSPG2-202ENST00000374676 KIF18AQ8NI77 898 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms