RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 TRHDEQ9UKU6 1024 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 PATJQ8NI35 1801 aa17.05■□□□□ 0.32
PHF1-202ENST00000374516 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 OR6C75A6NL08 312 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 TMEM114B3SHH9 223 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 H3BSA7 217 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 HMBSP08397 361 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 F7P08709 466 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 SLC5A2P31639 672 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 PRMT2P55345 433 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 KCTD11Q693B1 232 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 ATPAF2Q8N5M1 289 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 KLHL23Q8NBE8 558 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 GIPC2Q8TF65 315 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 FCRL3Q96P31 734 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 CPNE1Q99829 537 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 PKP2Q99959 881 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 CATSPERBQ9H7T0 1116 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 TLR6Q9Y2C9 796 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 SCN5AQ14524 2016 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 MYO16Q9Y6X6 1858 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 A0A0J9YVX5 310 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 TRIM13O60858 407 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 RPL17P18621 184 aaKnown RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 MAGEA12P43365 314 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 HSPA13P48723 471 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 PKNOX1P55347 436 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 TBX4P57082 545 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 CEACAM7Q14002 265 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 PSMD5Q16401 504 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 TFAP2DQ7Z6R9 452 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 BHLHE22Q8NFJ8 381 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 GAB3Q8WWW8 586 aa17.04■□□□□ 0.32
PHF1-202ENST00000374516 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
PHF1-202ENST00000374516 CCDC78A2IDD5 438 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.03■□□□□ 0.32
PHF1-202ENST00000374516 MATN2O00339 956 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 CFLARO15519 480 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 MAFKO60675 156 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 TRMUO75648 421 aaKnown RBP17.03■□□□□ 0.32
PHF1-202ENST00000374516 MT-CYBP00156 380 aaPredicted RBP17.03■□□□□ 0.32
PHF1-202ENST00000374516 POLBP06746 335 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 MAGEA11P43364 429 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 GPR17Q13304 367 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 LSM12Q3MHD2 195 aaKnown RBP17.03■□□□□ 0.32
PHF1-202ENST00000374516 ITPRIPL1Q6GPH6 555 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
PHF1-202ENST00000374516 ISL2Q96A47 359 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 CERS2Q96G23 380 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 SLC39A13Q96H72 371 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 BFARQ9NZS9 450 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 PCDH10Q9P2E7 1040 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 PRSS51A0A1B0GVH4 220 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
PHF1-202ENST00000374516 ADAM12O43184 909 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 HOXC13P31276 330 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 COG7P83436 770 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 FSTL4Q6MZW2 842 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 RNF148Q8N7C7 305 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 MFSD3Q96ES6 412 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 PPP1R36Q96LQ0 422 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 VAT1Q99536 393 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 PADI4Q9UM07 663 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 CEPT1Q9Y6K0 416 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 AK5Q9Y6K8 562 aa17.03■□□□□ 0.32
PHF1-202ENST00000374516 NEMP1O14524 444 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 CDH2P19022 906 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 ME2P23368 584 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 CCNCP24863 283 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 EPHA3P29320 983 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 SPRP35270 261 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 ADARP55265 1226 aaKnown RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 ADRM1Q16186 407 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 PGAM4Q8N0Y7 254 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 SREK1Q8WXA9 508 aaKnown RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 DLG3Q92796 817 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 USP13Q92995 863 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 ZNF669Q96BR6 464 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 RCN3Q96D15 328 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 MOCOSQ96EN8 888 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 RBBP8Q99708 897 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 GATA5Q9BWX5 397 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 SLC2A11Q9BYW1 496 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 SUDS3Q9H7L9 328 aaPredicted RBP17.02■□□□□ 0.32
PHF1-202ENST00000374516 CASS4Q9NQ75 786 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 CHRAC1Q9NRG0 131 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 RHBDL2Q9NX52 303 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 THEGQ9P2T0 379 aa17.02■□□□□ 0.32
PHF1-202ENST00000374516 A0A096LPK6 155 aa17.02■□□□□ 0.31
PHF1-202ENST00000374516 HDAC3O15379 428 aa17.02■□□□□ 0.31
PHF1-202ENST00000374516 BCAS2O75934 225 aaPredicted RBP17.02■□□□□ 0.31
PHF1-202ENST00000374516 CNTN5O94779 1100 aa17.02■□□□□ 0.31
PHF1-202ENST00000374516 CHRNGP07510 517 aa17.02■□□□□ 0.31
PHF1-202ENST00000374516 IMPDH2P12268 514 aa17.02■□□□□ 0.31
PHF1-202ENST00000374516 DPP6P42658 865 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms