RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CORO1AP31146 461 aaKnown RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 RGRP47804 291 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ALDH1A3P47895 512 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 GEMP55040 296 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 RALGDSQ12967 914 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 BTG3Q14201 252 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CBX2Q14781 532 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-203ENST00000374429 MBLAC2Q68D91 279 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CD300LGQ6UXG3 332 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 FRMD7Q6ZUT3 714 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CLDN19Q8N6F1 224 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 ANKRD49Q8WVL7 239 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 CDK15Q96Q40 435 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
CXCL12-203ENST00000374429 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 DYTNA2CJ06 578 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MTMR11A4FU01 709 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MATN3O15232 486 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ZBTB14O43829 449 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 OR1I1O60431 355 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 KPNA6O60684 536 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TBX10O75333 385 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 RHOCP08134 193 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ATP5C1P36542 298 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 BTKQ06187 659 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 SEL1L3Q68CR1 1132 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 DET1Q7L5Y6 550 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ZC3HC1Q86WB0 502 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TRPC4APQ8TEL6 797 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 BCL7CQ8WUZ0 217 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MTFMTQ96DP5 389 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MRGPRX2Q96LB1 330 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 OLFM1Q99784 485 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 URB1O60287 2271 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 KRT87PA6NCN2 255 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 E5RI56 91 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 NDUFS3O75489 264 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MT-ND1P03886 318 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MRPS22P82650 360 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ZNF177Q13360 481 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 CDH18Q13634 790 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TRIP10Q15642 601 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 GK5Q6ZS86 529 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 BHLHA9Q7RTU4 235 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 RTL3Q8N8U3 475 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MAGEC3Q8TD91 643 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 NUDT8Q8WV74 236 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 RCN3Q96D15 328 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 FRMD8Q9BZ67 464 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 IGSF9Q9P2J2 1179 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 GGA2Q9UJY4 613 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 NCAM2O15394 837 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TIMM44O43615 452 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 DLX3O60479 287 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 SRP72O76094 671 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 C1RP00736 705 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 CCND1P24385 295 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MCCD1P59942 119 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TBL3Q12788 808 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 AGKQ53H12 422 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 SIRPB2Q5JXA9 342 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 STXBP5Q5T5C0 1151 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 MFSD6LQ8IWD5 586 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 LMNTD2Q8IXW0 634 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ULK2Q8IYT8 1036 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 UCMAQ8WVF2 138 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 SCG3Q8WXD2 468 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 SEPT8Q92599 483 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 NSUN5Q96P11 429 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 YME1L1Q96TA2 773 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 UBE2OQ9C0C9 1292 aaKnown RBP10.87□□□□□ -0.67
CXCL12-203ENST00000374429 RNF38Q9H0F5 515 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 FBXO44Q9H4M3 255 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TMEM39AQ9NV64 488 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ZMYM5Q9UJ78 669 aa10.87□□□□□ -0.67
CXCL12-203ENST00000374429 ARHGAP10A1A4S6 786 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 SRRM3A6NNA2 597 aaPredicted RBP10.86□□□□□ -0.67
CXCL12-203ENST00000374429 TBL1XO60907 577 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 PEX11AO75192 247 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 SELPP16109 830 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 OXCT1P55809 520 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
CXCL12-203ENST00000374429 MAP7D1Q3KQU3 841 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 XKR4Q5GH76 650 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 GLT6D1Q7Z4J2 308 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 ABTB1Q969K4 478 aaPredicted RBP10.86□□□□□ -0.67
CXCL12-203ENST00000374429 ARPC5LQ9BPX5 153 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 GPR63Q9BZJ6 419 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 LRMDAQ9H2I8 198 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 RNPEPL1Q9HAU8 725 aa10.86□□□□□ -0.67
CXCL12-203ENST00000374429 DLGAP2Q9P1A6 1054 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms