RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 MARCH4Q9P2E8 410 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ITM2BQ9Y287 266 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PRG3Q9Y2Y8 225 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ASB3Q9Y575 518 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 FNDC1Q4ZHG4 1894 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TCAF2A6NFQ2 919 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MANSC4A6NHS7 340 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 KPNA6O60684 536 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TYMPP19971 482 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 DNAJB2P25686 324 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CCND3P30281 292 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PPARGP37231 505 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 KCNC1P48547 511 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 RAB27AP51159 221 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ATXN3P54252 364 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MS4A2Q01362 244 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PTPRCAPQ14761 206 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PSMD5Q16401 504 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 UGP2Q16851 508 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TECRLQ5HYJ1 363 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 SH2D4BQ5SQS7 431 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 NXNQ6DKJ4 435 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CCSAPQ6IQ19 270 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CYHR1Q6ZMK1 362 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TRIM67Q6ZTA4 783 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PIM3Q86V86 326 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 RNF135Q8IUD6 432 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CCDC117Q8IWD4 279 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 IGSF8Q969P0 613 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PSMG2Q969U7 264 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PABPC5Q96DU9 382 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 IMP4Q96G21 291 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MAELQ96JY0 434 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 B3GALT6Q96L58 329 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PPP1R12CQ9BZL4 782 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CRISPLD1Q9H336 500 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MRM3Q9HC36 420 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MID2Q9UJV3 735 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 DSEQ9UL01 958 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 NOD1Q9Y239 953 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 FIS1Q9Y3D6 152 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 RGSL1A5PLK6 1076 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 A8MT66 165 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 WASH4PA8MWX3 477 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 AP3B1O00203 1094 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MUSKO15146 869 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 WISP3O95389 354 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ATXN1LP0C7T5 689 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 COL6A2P12110 1019 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 HDCP19113 662 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 FLT3LGP49771 235 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CDKN2DP55273 166 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 DSC1Q08554 894 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 HNRNPDQ14103 355 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TRIP10Q15642 601 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MAPRE1Q15691 268 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PPP1R3AQ16821 1122 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CCDC92Q53HC0 331 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PIGGQ5H8A4 983 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 C10orf62Q5T681 223 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 FBXL19Q6PCT2 694 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TRAF7Q6Q0C0 670 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 GK5Q6ZS86 529 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 LILRA2Q8N149 483 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ZNF687Q8N1G0 1237 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 THEM5Q8N1Q8 247 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 UMODL1-AS1Q8N2C9 162 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ATAD1Q8NBU5 361 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 FAM156AQ8NDB6 213 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ARRDC2Q8TBH0 407 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PTCD2Q8WV60 388 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 TSNARE1Q96NA8 513 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 SERPINB11Q96P15 392 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CDRT15Q96T59 188 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 NPAS2Q99743 824 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 MRPL57Q9BQC6 102 aaKnown RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ZCWPW1Q9H0M4 648 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 SLC25A51Q9H1U9 297 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ARNT2Q9HBZ2 717 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ZBTB26Q9HCK0 441 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CLIC5Q9NZA1 410 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-202ENST00000374389 HCSTQ9UBK5 93 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 STK39Q9UEW8 545 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 CDYLQ9Y232 598 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 ACTL7AQ9Y615 435 aa5.39□□□□□ -1.55
SRRM1-202ENST00000374389 PATJQ8NI35 1801 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 MAGEA13PA6NCF6 341 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 ANKRD33BA6NCL7 494 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 ENO4A6NNW6 628 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 UBFD1O14562 309 aaKnown RBP5.38□□□□□ -1.55
SRRM1-202ENST00000374389 CFLARO15519 480 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 MT-CO1P00395 513 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 THRAP10827 490 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 ENO3P13929 434 aaPredicted RBP5.38□□□□□ -1.55
SRRM1-202ENST00000374389 TSPAN8P19075 237 aa5.38□□□□□ -1.55
SRRM1-202ENST00000374389 ATP5F1P24539 256 aaPredicted RBP5.38□□□□□ -1.55
SRRM1-202ENST00000374389 ACVRL1P37023 503 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms