RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CREMQ03060 361 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 HSPA14Q0VDF9 509 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 B3GNT6Q6ZMB0 384 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ZNF354BQ96LW1 612 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CATSPERZQ9NTU4 200 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 WBP11Q9Y2W2 641 aaKnown RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 FFAR3O14843 346 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 GPR42O15529 346 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PIGNO95427 931 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 ZBTB11O95625 1053 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 NOS2P35228 1153 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 SNRPD1P62314 119 aaKnown RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 DAW1Q8N136 415 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 ASTN1O14525 1302 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 CHRNGP07510 517 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PECAM1P16284 738 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 NKX2-3Q8TAU0 364 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 TTPALQ9BTX7 342 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 C2orf49Q9BVC5 232 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 AKAP7Q9P0M2 348 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 CFAP97Q9P2B7 532 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 CRNNQ9UBG3 495 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF232Q9UNY5 417 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PCP4L1A6NKN8 68 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 RPA3P35244 121 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 FAM187BQ17R55 369 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PPP1R26Q5T8A7 1209 aaPredicted RBP14.39□□□□□ -0.11
TRAF1-201ENST00000373887 GCNT7Q6ZNI0 430 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 SCLYQ96I15 445 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 SEMA3DO95025 777 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 OR5F1O95221 314 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PSMG1O95456 288 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 FAM153BP0C7A2 387 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 RABGGTBP53611 331 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 CCL14Q16627 93 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 FAM153CQ494X1 144 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 RNF19BQ6ZMZ0 732 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 OR10G6Q8NH81 332 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 SELENOMQ8WWX9 145 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 DSN1Q9H410 356 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PADI3Q9ULW8 664 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 C15orf41Q9Y2V0 281 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 STX16-NPEPL1H3BU86 382 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 STX16O14662 325 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 TMCC2O75069 709 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 TSPAN8P19075 237 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 PTENP60484 403 aa14.39□□□□□ -0.11
TRAF1-201ENST00000373887 SLC25A12O75746 678 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ATP13A4Q4VNC1 1196 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 HYIQ5T013 277 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 NANOGNBQ7Z5D8 188 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 OR52K1Q8NGK4 314 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ASB8Q9H765 288 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SMPD1P17405 629 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 PTPN5P54829 565 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ZNHIT3Q15649 155 aaPredicted RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TIMM50Q3ZCQ8 353 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ESRP1Q6NXG1 681 aaKnown RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ARHGAP36Q6ZRI8 547 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 DNAJB14Q8TBM8 379 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 LENG9Q96B70 501 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ZFP14Q9HCL3 533 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 DMGDHQ9UI17 866 aaKnown RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TLR5O60602 858 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 CYP4B1P13584 511 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 FCHO2Q0JRZ9 810 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 RFX4Q33E94 735 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 GPR156Q8NFN8 814 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ZNF184Q99676 751 aaPredicted RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 AGXT2Q9BYV1 514 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 BTRCQ9Y297 605 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3DA0A087WVF3 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3IA0A087WXS9 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3EA0A087X179 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3KA0A087X1G2 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3FA6NER0 549 aaPredicted RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3LB9A6J9 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3HP0C7X1 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 MYL9P24844 172 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 GLUD2P49448 558 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 ARHGDIBP52566 201 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 GRB14Q14449 540 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3GQ6DHY5 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3CQ6IPX1 549 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 TBC1D3Q8IZP1 549 aaPredicted RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SLAIN1Q8ND83 568 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 PJA1Q8NG27 643 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 STK32AQ8WU08 396 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 SLC25A23Q9BV35 468 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 FAM126AQ9BYI3 521 aaPredicted RBP14.38□□□□□ -0.11
TRAF1-201ENST00000373887 OR10H1Q9Y4A9 318 aa14.38□□□□□ -0.11
TRAF1-201ENST00000373887 OR10H2O60403 315 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms