RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 FIZ1Q96SL8 496 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 PDZK1P1A8MUH7 402 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 IFNA14P01570 189 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 NMBRP28336 390 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 HUNKP57058 714 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 LPIN1Q14693 890 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 HECTD2Q5U5R9 776 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 GLT1D1Q96MS3 346 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 RAD21L1Q9H4I0 556 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF395Q9H8N7 513 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 H3BNX3 289 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 KRT20P35900 424 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 ALDH7A1P49419 539 aaKnown RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 BEX3Q00994 111 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 C1orf220Q5T0J3 134 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 CDYL2Q8N8U2 506 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 PTTG2Q9NZH5 202 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SQORQ9Y6N5 450 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 ATP6V0D1P61421 351 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 ELMSAN1Q6PJG2 1045 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 TXNDC11Q6PKC3 985 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 BPIFB6Q8NFQ5 453 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SPPL2AQ8TCT8 520 aa17.5■□□□□ 0.39
PTPRU-202ENST00000373779 UTP15Q8TED0 518 aaKnown RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 FAM126AQ9BYI3 521 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 SENP6Q9GZR1 1112 aaPredicted RBP17.5■□□□□ 0.39
PTPRU-202ENST00000373779 STAU1O95793 577 aaKnown RBP17.49■□□□□ 0.39
PTPRU-202ENST00000373779 GRIA1P42261 906 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 RNF180Q86T96 592 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 PROSER1Q86XN7 944 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 SPPL2CQ8IUH8 684 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 SKA1Q96BD8 255 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 C1orf21Q9H246 121 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 KLQ9UEF7 1012 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 ZMYND8Q9ULU4 1186 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-202ENST00000373779 SLC22A2O15244 555 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 PAGE1O75459 146 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 LGR5O75473 907 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TPP2P29144 1249 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-202ENST00000373779 PIK3CGP48736 1102 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 GLUD2P49448 558 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TRAF7Q6Q0C0 670 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 SPESP1Q6UW49 350 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TPD52L3Q96J77 140 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 C3orf18Q9UK00 162 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 IPPQ9Y573 584 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TRIM24O15164 1050 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 ITGAXP20702 1163 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 CDK18Q07002 472 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 BNIPLQ7Z465 357 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TBC1D21Q8IYX1 336 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 RAET1EQ8TD07 263 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 KANSL3Q9P2N6 904 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 ZNF214Q9UL59 606 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-202ENST00000373779 FADS3Q9Y5Q0 445 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 PCNAP12004 261 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 GSSP48637 474 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 PTPRNQ16849 979 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 FAM187BQ17R55 369 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 OR7A2PQ8NGA2 310 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 LRTOMTQ8WZ04 291 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 C8orf4Q9NR00 106 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 UXTQ9UBK9 157 aaPredicted RBP17.49■□□□□ 0.39
PTPRU-202ENST00000373779 TBC1D30Q9Y2I9 924 aa17.49■□□□□ 0.39
PTPRU-202ENST00000373779 ANXA6P08133 673 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 AOC1P19801 751 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 GALK1P51570 392 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 DGCR6Q14129 220 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 OR8H2Q8N162 312 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 FSTL5Q8N475 847 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-202ENST00000373779 H2AFY2Q9P0M6 372 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-202ENST00000373779 KCNH4Q9UQ05 1017 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 SLC22A3O75751 556 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 ATXN8OSP0DMR3 200 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TRAF3Q13114 568 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TRIM25Q14258 630 aaKnown RBP17.48■□□□□ 0.39
PTPRU-202ENST00000373779 MAPKAPK3Q16644 382 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 ARMCX4Q5H9R4 360 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 FAM171A1Q5VUB5 890 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 CLEC4CQ8WTT0 213 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TWNKQ96RR1 684 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 DUSP12Q9UNI6 340 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 NR2E3Q9Y5X4 410 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 SOWAHBA6NEL2 793 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 DLDP09622 509 aaKnown RBP17.48■□□□□ 0.39
PTPRU-202ENST00000373779 CRYBB1P53674 252 aaPredicted RBP17.48■□□□□ 0.39
PTPRU-202ENST00000373779 DLG2Q15700 870 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TMEM192Q8IY95 271 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 OR4L1Q8NH43 312 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 PPP3R2Q96LZ3 170 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 SFMBT1Q9UHJ3 866 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 PIRTP0C851 137 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 TTPAP49638 278 aa17.48■□□□□ 0.39
PTPRU-202ENST00000373779 CNTN1Q12860 1018 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms