RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 TAF4O00268 1085 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 LPXNO60711 386 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 JRKO75564 520 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MT-ND3P03897 115 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 DHRS4L1P0CG22 281 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SSTR1P30872 391 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SCNN1AP37088 669 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 AP2S1P53680 142 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PRKCQQ04759 706 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MBTD1Q05BQ5 628 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 OVGP1Q12889 678 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TFDP2Q14188 446 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PLA2G4EQ3MJ16 856 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ZNF667Q5HYK9 610 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ZNF484Q5JVG2 852 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PLEKHM3Q6ZWE6 761 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 GALNT5Q7Z7M9 940 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 CAMK1DQ8IU85 385 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RHPN2Q8IUC4 686 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ARFGAP1Q8N6T3 406 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 DNAAF3Q8N9W5 541 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ACTRT2Q8TDY3 377 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ASZ1Q8WWH4 475 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 LRRC39Q96DD0 335 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 APOPT1Q96IL0 206 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TMEM120AQ9BXJ8 343 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MKRN2Q9H000 416 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ELAC1Q9H777 363 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 GPRC5DQ9NZD1 345 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SLC17A7Q9P2U7 560 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 STX18Q9P2W9 335 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 VWA7Q9Y334 891 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MAD1L1Q9Y6D9 718 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MGAMO43451 1857 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 A0A0G2JLL6 359 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 A6NL46 340 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 AREL1O15033 823 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TMEM127O75204 238 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TRUB2O95900 331 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TCF4P15884 667 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TGM2P21980 687 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PMLP29590 882 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RFC1P35251 1148 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ADH7P40394 386 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 KCNJ5P48544 419 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 HCAR3P49019 387 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ERVK-21P61565 698 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RNF4P78317 190 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SLC18A2Q05940 514 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 NOMO1Q15155 1222 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 C5orf22Q49AR2 442 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ACSBG2Q5FVE4 666 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ANGEL2Q5VTE6 544 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 C1orf146Q5VVC0 180 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SHQ1Q6PI26 577 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 MACC1Q6ZN28 852 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 CYS1Q717R9 158 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PRRT2Q7Z6L0 340 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SLC9B2Q86UD5 537 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 BBS7Q8IWZ6 715 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ADGRG5Q8IZF4 528 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 PDIK1LQ8N165 341 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 AFAP1L2Q8N4X5 818 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 LINC01465Q8N7H1 131 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 FBXO36Q8NEA4 188 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RAB3IL1Q8TBN0 382 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ACTL9Q8TC94 416 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 RNF139Q8WU17 664 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 TRIM62Q9BVG3 475 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 SYBUQ9NX95 663 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 POU2F3Q9UKI9 436 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ANGPTL2Q9UKU9 493 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 ITGA11Q9UKX5 1188 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 DIMT1Q9UNQ2 313 aaKnown RBP8.29□□□□□ -1.08
GARNL3-201ENST00000373386 DERAQ9Y315 318 aa8.29□□□□□ -1.08
GARNL3-201ENST00000373386 OR6C74A6NCV1 312 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CAPN9O14815 690 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 NBNO60934 754 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 BANF1O75531 89 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 KRT36O76013 467 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 ITGALP20701 1170 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 NEK3P51956 506 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RAP1GDS1P52306 607 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 PHC1P78364 1004 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 POU6F2P78424 691 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 PRKD1Q15139 912 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-201ENST00000373386 PPA1Q15181 289 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 FNBP1LQ5T0N5 605 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 DENND1BQ6P3S1 775 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 CAMKK1Q8N5S9 505 aa8.28□□□□□ -1.08
GARNL3-201ENST00000373386 RIN3Q8TB24 985 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms