RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PRORSD1PA6NEY8 169 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 PSMD12O00232 456 aaPredicted RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 UBFD1O14562 309 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 UBDO15205 165 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CYP11A1P05108 521 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 LTA4HP09960 611 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SCNN1GP51170 649 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 RPS6KA3P51812 740 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 PDAP1Q13442 181 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ACAP2Q15057 778 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 MAPRE2Q15555 327 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 MORN1Q5T089 497 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 KLHDC10Q6PID8 442 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 KDELC2Q7Z4H8 507 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CHERPQ8IWX8 916 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 OR13J1Q8NGT2 312 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ANKRD49Q8WVL7 239 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 UHRF1Q96T88 793 aaPredicted RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 GSTO2Q9H4Y5 243 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 PADI4Q9UM07 663 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 AP4S1Q9Y587 144 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TCRBV3S1A0A5B6 114 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 C7orf72A4D263 438 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 HDCP19113 662 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CCR1P32246 355 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CLCN5P51795 746 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 WNT3AP56704 352 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SEPT6Q14141 434 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 FASTKQ14296 549 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 MYLK3Q32MK0 819 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 C6orf10Q5SRN2 563 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ZFP28Q8NHY6 868 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CASP10Q92851 521 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
CTPS1-202ENST00000372621 ABCC13Q9NSE7 274 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 TMEM181Q9P2C4 612 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
CTPS1-202ENST00000372621 CENPFP49454 3210 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TTC3P53804 2025 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 HEATR9A2RTY3 570 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 MSI1O43347 362 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 ODC1P11926 461 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 MRPS6P82932 125 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 FAM45BPQ6NSW5 357 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TMEM207Q6UWW9 146 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 OR10T2Q8NGX3 314 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 FAM45AQ8TCE6 357 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 CALML6Q8TD86 181 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 PRPF18Q99633 342 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 PTPN18Q99952 460 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 SPAG4Q9NPE6 437 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 GIT1Q9Y2X7 761 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 FIS1Q9Y3D6 152 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 MYO16Q9Y6X6 1858 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 MYOCOSA0A1B0GUC4 107 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 PENKP01210 267 aaPredicted RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 RBP1P09455 135 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 CCDC166P0CW27 439 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TXNL4AP83876 142 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 NRG1Q02297 640 aaPredicted RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 AGKQ53H12 422 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 TAF2Q6P1X5 1199 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 IYDQ6PHW0 289 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 HACD2Q6Y1H2 254 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 LRRC49Q8IUZ0 686 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 LPGAT1Q92604 370 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 IMP4Q96G21 291 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 KATNAL1Q9BW62 490 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 SLC25A51Q9H1U9 297 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 CCDC167Q9P0B6 97 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 RNF11Q9Y3C5 154 aa12.82□□□□□ -0.36
CTPS1-202ENST00000372621 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
CTPS1-202ENST00000372621 WASH4PA8MWX3 477 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 E9PAM4 449 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
CTPS1-202ENST00000372621 SNRPB2P08579 225 aaKnown RBP12.81□□□□□ -0.36
CTPS1-202ENST00000372621 IMPDH1P20839 514 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 PURAQ00577 322 aaKnown RBP12.81□□□□□ -0.36
CTPS1-202ENST00000372621 BIRC2Q13490 618 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 IHHQ14623 411 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 HECTD2Q5U5R9 776 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 FAM219BQ5XKK7 198 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 BORAQ6PGQ7 559 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 SCD5Q86SK9 330 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 RNF135Q8IUD6 432 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 CILP2Q8IUL8 1156 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 SLC22A9Q8IVM8 553 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 ALDH16A1Q8IZ83 802 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 AFAP1L2Q8N4X5 818 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 LRTOMTQ8WZ04 291 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 L3HYPDHQ96EM0 354 aa12.81□□□□□ -0.36
CTPS1-202ENST00000372621 DTNBP1Q96EV8 351 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms