RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CA8P35219 290 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 NR4A2P43354 598 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CHRNA4P43681 627 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 KCNC1P48547 511 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 DMPKQ09013 629 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 LAPTM5Q13571 262 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 FASTKQ14296 549 aaKnown RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 PDK2Q15119 407 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 HSDL1Q3SXM5 330 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 METTL21CQ5VZV1 264 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 SLFN12LQ6IEE8 588 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 HFE2Q6ZVN8 426 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC80Q76M96 950 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 NANOGNBQ7Z5D8 188 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ITIH5Q86UX2 942 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CADM3Q8N126 398 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CLIP4Q8N3C7 705 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 DDHD1Q8NEL9 900 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 DNAJB14Q8TBM8 379 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 RSPH1Q8WYR4 309 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 VPS33AQ96AX1 596 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 TAMM41Q96BW9 452 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 SPATA13Q96N96 652 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ADI1Q9BV57 179 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 C1QTNF1Q9BXJ1 281 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF518BQ9C0D4 1074 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CDT1Q9H211 546 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 GBA2Q9HCG7 927 aaPredicted RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 PNPLA3Q9NST1 481 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 TBC1D23Q9NUY8 699 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 KLHL8Q9P2G9 620 aaPredicted RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 IGSF9Q9P2J2 1179 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 DAPK2Q9UIK4 370 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 GJD2Q9UKL4 321 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 UTS2RQ9UKP6 389 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 PRPF19Q9UMS4 504 aaKnown RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 INVSQ9Y283 1065 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CSADQ9Y600 493 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 NRXN2Q9P2S2 1712 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 HEATR9A2RTY3 570 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NME4O00746 187 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 UBFD1O14562 309 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MRASO14807 208 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CLOCKO15516 846 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SYNCRIPO60506 623 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ARIH2O95376 493 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 VTNP04004 478 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 POLBP06746 335 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ALDOCP09972 364 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TCF3P15923 654 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LRPAP1P30533 357 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CD68P34810 354 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 IREB2P48200 963 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LIMK2P53671 638 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FOXA1P55317 472 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RHDQ02161 417 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NFATC3Q12968 1075 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ZBTB17Q13105 803 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 AQP6Q13520 282 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LRP8Q14114 963 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CSHL1Q14406 222 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM132BQ14DG7 1078 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MAP7D1Q3KQU3 841 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ZBED5Q49AG3 693 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 RBM20Q5T481 1227 aaKnown RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ATF7IP2Q5U623 682 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SYPL2Q5VXT5 272 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM236Q5W0B7 351 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 STEAP4Q687X5 459 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 BORAQ6PGQ7 559 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CYHR1Q6ZMK1 362 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ARHGAP36Q6ZRI8 547 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NIPA1Q7RTP0 329 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 KCNMB4Q86W47 210 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MCF2L2Q86YR7 1114 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FUNDC1Q8IVP5 155 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 CDKL3Q8IVW4 592 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ABI1Q8IZP0 508 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 TMCO5AQ8N6Q1 288 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 NPWQ8N729 165 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 C18orf25Q96B23 403 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ASB9Q96DX5 294 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ZNF419Q96HQ0 510 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 HPDLQ96IR7 371 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 ANKRD36BP1Q96IX9 119 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 MUS81Q96NY9 551 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 QKIQ96PU8 341 aaKnown RBP eCLIP5.45□□□□□ -1.545e-8■■■■■ 36.1
ATG4A-204ENST00000372246 RHNO1Q9BSD3 238 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 FRMD8Q9BZ67 464 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LHPPQ9H008 270 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 LHX5Q9H2C1 402 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 HIPK3Q9H422 1215 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 GIN1Q9NXP7 522 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 QPCTLQ9NXS2 382 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 PLK2Q9NYY3 685 aa5.45□□□□□ -1.54
ATG4A-204ENST00000372246 KIAA1522Q9P206 1035 aaPredicted RBP5.45□□□□□ -1.54
ATG4A-204ENST00000372246 VANGL2Q9ULK5 521 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms