RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 NEK3P51956 506 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 DRG2P55039 364 aaKnown RBP14.8□□□□□ -0.04
NDC1-201ENST00000371429 NAA20P61599 178 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 CBX2Q14781 532 aaPredicted RBP14.8□□□□□ -0.04
NDC1-201ENST00000371429 RAB30Q15771 203 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 SNAP47Q5SQN1 464 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 RHBDF2Q6PJF5 856 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 CDYL2Q8N8U2 506 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
NDC1-201ENST00000371429 SLC40A1Q9NP59 571 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 LMO7Q8WWI1 1683 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 POP4O95707 220 aaKnown RBP14.8□□□□□ -0.04
NDC1-201ENST00000371429 ADSSP30520 456 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 MAPKAPK2P49137 400 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 GRSF1Q12849 480 aaKnown RBP eCLIP14.8□□□□□ -0.04
NDC1-201ENST00000371429 UBXN2BQ14CS0 331 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 CPSF6Q16630 551 aaKnown RBP eCLIP14.8□□□□□ -0.04
NDC1-201ENST00000371429 FAM187BQ17R55 369 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 AP5B1Q2VPB7 878 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 KHDRBS2Q5VWX1 349 aaKnown RBP14.8□□□□□ -0.04
NDC1-201ENST00000371429 ZNF662Q6ZS27 426 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 PARGQ86W56 976 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 KRT73Q86Y46 540 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 PLD5Q8N7P1 536 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 PROX1Q92786 737 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 AP2M1Q96CW1 435 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 RXFP1Q9HBX9 757 aa14.8□□□□□ -0.04
NDC1-201ENST00000371429 SEC13P55735 322 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 POU5F1Q01860 360 aaKnown RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 PIWIL4Q7Z3Z4 852 aaKnown RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 ACMSDQ8TDX5 336 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 UNC93B1Q9H1C4 597 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ABCG8Q9H221 673 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 A0A1W2PRU2 124 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 OTCP00480 354 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 IDSP22304 550 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 SERPINB3P29508 390 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 CXCR3P49682 368 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ZCWPW2Q504Y3 356 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ZBTB49Q6ZSB9 765 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ANKS1BQ7Z6G8 1248 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 GPR135Q8IZ08 494 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 AUTS2Q8WXX7 1259 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ANKRD26Q9UPS8 1709 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 PIAS1O75925 651 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 COPZ1P61923 177 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 TMEM63BQ5T3F8 832 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 DNAJB7Q7Z6W7 309 aaPredicted RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 DHFR2Q86XF0 187 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 TMPRSS6Q8IU80 811 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 GPR156Q8NFN8 814 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 UTP15Q8TED0 518 aaKnown RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 ART4Q93070 314 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 MRPL48Q96GC5 212 aaKnown RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 FAXDC2Q96IV6 333 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ACSS3Q9H6R3 686 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 DMAC2Q9NW81 257 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 INVSQ9Y283 1065 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 KLHL20Q9Y2M5 609 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 NID2Q14112 1375 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 A0A1W2PQ45 241 aaPredicted RBP14.79□□□□□ -0.04
NDC1-201ENST00000371429 A0A1W2PQY0 241 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 YJEFN3A6XGL0 299 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 E7ENQ6 273 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 UMPSP11172 480 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 CCNCP24863 283 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 NPY5RQ15761 445 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 TRIM60Q495X7 471 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 FGD3Q5JSP0 725 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ARHGAP17Q68EM7 881 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ZNF544Q6NX49 715 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 RNF148Q8N7C7 305 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 CNBD2Q96M20 576 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 PWWP2AQ96N64 755 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 TMEM245Q9H330 911 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 FAM83DQ9H4H8 585 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 OR10H1Q9Y4A9 318 aa14.79□□□□□ -0.04
NDC1-201ENST00000371429 ZNF536O15090 1300 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 CICQ96RK0 1608 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 ABHD2P08910 425 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 FASP25445 335 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 RABGGTBP53611 331 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 FNBP1LQ5T0N5 605 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 GPRIN3Q6ZVF9 776 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 PIWIL2Q8TC59 973 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 PPP3R2Q96LZ3 170 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 HEPHQ9BQS7 1158 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 TBCDQ9BTW9 1192 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 RNF39Q9H2S5 420 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 ARIH1Q9Y4X5 557 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 SHPRHQ149N8 1683 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 DEAF1O75398 565 aaPredicted RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 RPP40O75818 363 aaKnown RBP14.78□□□□□ -0.04
NDC1-201ENST00000371429 VIPP01282 170 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 UQCRBP14927 111 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 SOWAHAQ2M3V2 549 aa14.78□□□□□ -0.04
NDC1-201ENST00000371429 USP39Q53GS9 565 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms