RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PDK3Q15120 406 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ATAD3BQ5T9A4 648 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 FBXL19Q6PCT2 694 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PLEKHM3Q6ZWE6 761 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF516Q92618 1163 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 KLHL5Q96PQ7 755 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 AGO3Q9H9G7 860 aaKnown RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PADI3Q9ULW8 664 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TRIM17Q9Y577 477 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 NRP2O60462 931 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SNAP91O60641 907 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TBL1XO60907 577 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ABCB1P08183 1280 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ASPAP45381 313 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 NR1H2P55055 460 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TAF10Q12962 218 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 NEDD8Q15843 81 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SDHAF4Q5VUM1 108 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 CUZD1Q86UP6 607 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF567Q8N184 647 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 NETO2Q8NC67 525 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 DNAJB14Q8TBM8 379 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 HOPXQ9BPY8 73 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 TTPALQ9BTX7 342 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SENP6Q9GZR1 1112 aaPredicted RBP11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 SLC25A51Q9H1U9 297 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 CHRAC1Q9NRG0 131 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 DUSP12Q9UNI6 340 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 PSMD13Q9UNM6 376 aa11.91□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF541Q9H0D2 1346 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ABLIM1O14639 778 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 SGTAO43765 313 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 GUCY1B2O75343 617 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 NDST3O95803 873 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 WARSP23381 471 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 CDH13P55290 713 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 DAOAP59103 153 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 UBE3AQ05086 875 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 NOGQ13253 232 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 TOP3AQ13472 1001 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PWP1Q13610 501 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 CYP4Z2PQ8N1L4 340 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ZNF513Q8N8E2 541 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 CD101Q93033 1021 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 MPP4Q96JB8 637 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 COPS8Q99627 209 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ROGDIQ9GZN7 287 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ZDHHC6Q9H6R6 413 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 SNX8Q9Y5X2 465 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PRMT5O14744 637 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 FAM155BO75949 473 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PAX7P23759 505 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PPM1AP35813 382 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 FLT3LGP49771 235 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ITGA7Q13683 1181 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ZCCHC8Q6NZY4 707 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 MARK2Q7KZI7 788 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 TRAPPC5Q8IUR0 188 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PQLC1Q8N2U9 271 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 MAGEE2Q8TD90 523 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ELMO1Q92556 727 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 TSEN34Q9BSV6 310 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 OSBPL11Q9BXB4 747 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ARMC7Q9H6L4 198 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 BCAS3Q9H6U6 928 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ASAH2Q9NR71 780 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 DNAJC28Q9NX36 388 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 IGSF9Q9P2J2 1179 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 RPS6KA6Q9UK32 745 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 HNRNPDQ14103 355 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 CCDC142Q17RM4 750 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 INO80DQ53TQ3 878 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 ZCCHC7Q8N3Z6 543 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 RBM15BQ8NDT2 890 aaKnown RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 PPP1R16AQ96I34 528 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 TPD52L3Q96J77 140 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 EXOC2Q96KP1 924 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 CORO1CQ9ULV4 474 aaPredicted RBP11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
DEPDC1-201ENST00000370966 RGPD8O14715 1765 aaPredicted RBP11.9□□□□□ -0.51
DEPDC1-201ENST00000370966 A0A1W2PQH9 124 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 DHRS12A0PJE2 317 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 A8MX80 341 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 DYRK3O43781 588 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 RPP40O75818 363 aaKnown RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CXCR2P25025 360 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 SLC5A3P53794 718 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNF549Q6P9A3 640 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
DEPDC1-201ENST00000370966 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms