RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PTK2BQ14289 1009 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 WHAMMP3Q1A5X7 153 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 DEFB133Q30KQ1 61 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 ACBD5Q5T8D3 534 aaPredicted RBP15.3■□□□□ 0.04
RPF1-202ENST00000370656 RETSATQ6NUM9 610 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 XKR5Q6UX68 686 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 CLEC14AQ86T13 490 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 DOCK4Q8N1I0 1966 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 C1orf131Q8NDD1 294 aaKnown RBP15.3■□□□□ 0.04
RPF1-202ENST00000370656 HES6Q96HZ4 224 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 LENG8Q96PV6 779 aaPredicted RBP15.3■□□□□ 0.04
RPF1-202ENST00000370656 PSMB7Q99436 277 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 TNKS2Q9H2K2 1166 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 MRPL47Q9HD33 250 aaKnown RBP15.3■□□□□ 0.04
RPF1-202ENST00000370656 WDR70Q9NW82 654 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 RRN3Q9NYV6 651 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 CTTNBP2NLQ9P2B4 639 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 SPASTQ9UBP0 616 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 SCINQ9Y6U3 715 aa15.3■□□□□ 0.04
RPF1-202ENST00000370656 COL12A1Q99715 3063 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 A0A1W2PNU3 283 aaPredicted RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 M0QYT0 321 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 MUSKO15146 869 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 AP1G1O43747 822 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 CNTN5O94779 1100 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 ITGA2BP08514 1039 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 KRT10P13645 584 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 TCP1P17987 556 aaKnown RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 L1CAMP32004 1257 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 NOS2P35228 1153 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 THOP1P52888 689 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 NAP1L1P55209 391 aaKnown RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 SLC20A2Q08357 652 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 SPIDRQ14159 915 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 ARL13BQ3SXY8 428 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 BRMS1LQ5PSV4 323 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 DPY19L3Q6ZPD9 716 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 ZNF572Q7Z3I7 529 aaPredicted RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 PASD1Q8IV76 773 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 C3orf20Q8ND61 904 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 PRR11Q96HE9 360 aaPredicted RBP15.29■□□□□ 0.04
RPF1-202ENST00000370656 CPXM1Q96SM3 734 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 HEPHQ9BQS7 1158 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 CEP44Q9C0F1 390 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 WDCPQ9H6R7 721 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 SYNCQ9H7C4 482 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 CAAP1Q9H8G2 361 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 PARVAQ9NVD7 372 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 TMEM51Q9NW97 253 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 RNF14Q9UBS8 474 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 FADS3Q9Y5Q0 445 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 ALG6Q9Y672 507 aa15.29■□□□□ 0.04
RPF1-202ENST00000370656 TMEM191CA6NGB0 347 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 NEMP1O14524 444 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 RAD51BO15315 384 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
RPF1-202ENST00000370656 TSPAN6O43657 245 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 DAB1O75553 588 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ENDOD1O94919 500 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 GJB6O95452 261 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ANXA6P08133 673 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 OR1E1P30953 314 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 DNA2P51530 1060 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 CLN3Q13286 438 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 PTPN20Q4JDL3 420 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ALFQ53S48 1182 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ESRP1Q6NXG1 681 aaKnown RBP15.28■□□□□ 0.04
RPF1-202ENST00000370656 CRTC1Q6UUV9 634 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ZNF783Q6ZMS7 281 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 PCDH20Q8N6Y1 951 aaKnown RBP15.28■□□□□ 0.04
RPF1-202ENST00000370656 MSANTD4Q8NCY6 345 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 DENND6BQ8NEG7 585 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 RAB7BQ96AH8 199 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 C18orf8Q96DM3 657 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 C11orf70Q9BRQ4 267 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ARHGAP9Q9BRR9 750 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 BOCQ9BWV1 1114 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 SLC13A1Q9BZW2 595 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 TKTL2Q9H0I9 626 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 SYNDIG1Q9H7V2 258 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 APOBEC3BQ9UH17 382 aaKnown RBP15.28■□□□□ 0.04
RPF1-202ENST00000370656 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 ATXN7L1Q9ULK2 861 aaPredicted RBP15.28■□□□□ 0.04
RPF1-202ENST00000370656 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 WASF2Q9Y6W5 498 aa15.28■□□□□ 0.04
RPF1-202ENST00000370656 A0A0D9SEW6 157 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 SIGLEC16A6NMB1 481 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 MIF4GDA9UHW6 222 aaKnown RBP15.27■□□□□ 0.04
RPF1-202ENST00000370656 TMX2-CTNND1H3BSU7 103 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 SLU7O95391 586 aaKnown RBP15.27■□□□□ 0.04
RPF1-202ENST00000370656 F9P00740 461 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 MAN1A1P33908 653 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 SCNN1AP37088 669 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 SLC1A1P43005 524 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 INHBCP55103 352 aa15.27■□□□□ 0.04
RPF1-202ENST00000370656 SLC6A3Q01959 620 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms