RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 VN1R5Q7Z5H4 357 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ANKS1BQ7Z6G8 1248 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PARP8Q8N3A8 854 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 UXS1Q8NBZ7 420 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 COX4I2Q96KJ9 171 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 GINS4Q9BRT9 223 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 SF3B1O75533 1304 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 LGALS2P05162 132 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 CRATP43155 626 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 RAB27AP51159 221 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PPP1R15BQ5SWA1 713 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ARMC12Q5T9G4 340 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 EEF1DP3Q658K8 133 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 TXNDC11Q6PKC3 985 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 XYLT1Q86Y38 959 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 SPPL2CQ8IUH8 684 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 MCFD2Q8NI22 146 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ZNF317Q96PQ6 595 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 VPS35Q96QK1 796 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 EBF2Q9HAK2 575 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PNPLA8Q9NP80 782 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 SIX2Q9NPC8 291 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 CLN6Q9NWW5 311 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PRKAG3Q9UGI9 489 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 MST1RQ04912 1400 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PRR23AA6NEV1 266 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 GBE1Q04446 702 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PRKCQQ04759 706 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ARHGAP15Q53QZ3 475 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ZNF513Q8N8E2 541 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 AKT1S1Q96B36 256 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 CSPG4P5Q96PW8 444 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 OSBPL6Q9BZF3 934 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 TRNAU1APQ9NX07 287 aaKnown RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 MRPL39Q9NYK5 338 aaKnown RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 TCEA3O75764 348 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 GRK4P32298 578 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 NUP62P37198 522 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 TMEM132BQ14DG7 1078 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ARL13AQ5H913 290 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 DRICH1Q6PGQ1 229 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 POMPQ9Y244 141 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 G3V2T6 193 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CHRNB2P17787 502 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 IFNGR2P38484 337 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 TTPAP49638 278 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CNPY1Q3B7I2 92 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ZCCHC8Q6NZY4 707 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 STX11O75558 287 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CDK9P50750 372 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 PSMD5Q16401 504 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 AFTPHQ6ULP2 937 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 HDAC10Q969S8 669 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 TMCC2O75069 709 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 C4BPAP04003 597 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 NOS3P29474 1203 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 GSTM5P46439 218 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 RPS6KA3P51812 740 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 GTF2A2P52657 109 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CSNK2BP67870 215 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 BCL2L1Q07817 233 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 STX4Q12846 297 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ELAVL2Q12926 359 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 NDUFA5Q16718 116 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 CRTC3Q6UUV7 619 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC4A11Q8NBS3 891 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 LEMD2Q8NC56 503 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 RHOBTB2Q9BYZ6 727 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 MARCH2Q9P0N8 246 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 FETUBQ9UGM5 382 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ERGIC3Q9Y282 383 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 OTCP00480 354 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 QPRTQ15274 297 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ATAD3BQ5T9A4 648 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 UTS2BQ765I0 119 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 PAGE2Q7Z2X7 111 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 TRMT11Q7Z4G4 463 aaKnown RBP17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 AKAP14Q86UN6 197 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 ASZ1Q8WWH4 475 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 MYLPFQ96A32 169 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 SEMA3CQ99985 751 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 SDCBP2Q9H190 292 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 RPS6KB2Q9UBS0 482 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 HES2Q9Y543 173 aa17.21■□□□□ 0.35
PTP4A1-201ENST00000370651 TBX10O75333 385 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 RTN3O95197 1032 aaPredicted RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 ACTR3P61158 418 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CYP4F2P78329 520 aa17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 MRPS5P82675 430 aaKnown RBP17.2■□□□□ 0.34
PTP4A1-201ENST00000370651 CYP4F3Q08477 520 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms