RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 HK3P52790 923 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 UCNP55089 124 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 CLDN6P56747 220 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 BCL2L1Q07817 233 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 NFATC4Q14934 902 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 IRF4Q15306 451 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 BOLA3Q53S33 107 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 RALGPS1Q5JS13 557 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 RBM44Q6ZP01 1051 aaKnown RBP16.27■□□□□ 0.2
VMA21-202ENST00000370361 SRLQ86TD4 932 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 BBS5Q8N3I7 341 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 SYN2Q92777 582 aaPredicted RBP16.27■□□□□ 0.2
VMA21-202ENST00000370361 ECHDC3Q96DC8 303 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 WRAP53Q9BUR4 548 aaKnown RBP16.27■□□□□ 0.2
VMA21-202ENST00000370361 LRRC61Q9BV99 259 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 SLC39A8Q9C0K1 460 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 THSD1Q9NS62 852 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 SEPT3Q9UH03 358 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 DOLKQ9UPQ8 538 aa16.27■□□□□ 0.2
VMA21-202ENST00000370361 EIF4E1BA6NMX2 242 aaKnown RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 J3KR12 359 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 TLX3O43711 291 aaPredicted RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 PIGNO95427 931 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 HOXC4P09017 264 aaPredicted RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 ERCC2P18074 760 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 ARL4AP40617 200 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 PIGHQ14442 188 aaPredicted RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 CDKN3Q16667 212 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 ISXQ2M1V0 245 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 DEFB133Q30KQ1 61 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 EFL1Q7Z2Z2 1120 aaKnown RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 ZNF571Q7Z3V5 609 aaPredicted RBP16.26■□□□□ 0.19
VMA21-202ENST00000370361 GKN2Q86XP6 184 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 ARL10Q8N8L6 244 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 ZNF653Q96CK0 615 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 EXOC2Q96KP1 924 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 ISCUQ9H1K1 167 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 PCSK1NQ9UHG2 260 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 PCDHGA8Q9Y5G5 932 aa16.26■□□□□ 0.19
VMA21-202ENST00000370361 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 CPED1A4D0V7 1026 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 TMX2-CTNND1H3BSU7 103 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 PDE2AO00408 941 aaPredicted RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 INSIG1O15503 277 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 SOCS5O75159 536 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 USP12O75317 370 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 LRCH4O75427 683 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 SERPINC1P01008 464 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 CTSEP14091 401 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 SERPINB6P35237 376 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 LIG3P49916 1009 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 ADKP55263 362 aaKnown RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 GABREP78334 506 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 DPYSQ14117 519 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 DPYSL2Q16555 572 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 WSCD2Q2TBF2 565 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 SOWAHCQ53LP3 525 aaPredicted RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 PPP6R3Q5H9R7 873 aaPredicted RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 LRRC73Q5JTD7 316 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 TPRG1LQ5T0D9 272 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 BROXQ5VW32 411 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 GUSBP11Q6P575 273 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 ARHGAP12Q8IWW6 846 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 PAF1Q8N7H5 531 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 CCDC97Q96F63 343 aaPredicted RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 CELF6Q96J87 481 aaKnown RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 WDR92Q96MX6 357 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 KCTD15Q96SI1 283 aaPredicted RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 APOOQ9BUR5 198 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 PRORYQ9H606 182 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 MBNL1Q9NR56 388 aaKnown RBP16.25■□□□□ 0.19
VMA21-202ENST00000370361 HAUS2Q9NVX0 235 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 GPATCH2LQ9NWQ4 482 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 DGKBQ9Y6T7 804 aa16.25■□□□□ 0.19
VMA21-202ENST00000370361 TEX51A0A1B0GUA7 166 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 DFFAO00273 331 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 CACNB4O00305 520 aaPredicted RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 DDX3XO00571 662 aaKnown RBP eCLIP16.24■□□□□ 0.192e-31■■■■■ 40.1
VMA21-202ENST00000370361 TNFRSF10CO14798 259 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 YY2O15391 372 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 GCATO75600 419 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 ELFN1P0C7U0 828 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 TSHRP16473 764 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 KIAA1024LP59773 190 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 EIF3IQ13347 325 aaKnown RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 NR1I3Q14994 352 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 CAMK1DQ8IU85 385 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 SLC35F3Q8IY50 421 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 RBFAQ8N0V3 343 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 ARFGAP1Q8N6T3 406 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 NIPA2Q8N8Q9 360 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 TSEN2Q8NCE0 465 aaKnown RBP16.24■□□□□ 0.19
VMA21-202ENST00000370361 NSMCE1Q8WV22 266 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 TEKT4Q8WW24 435 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 HIC2Q96JB3 615 aa16.24■□□□□ 0.19
VMA21-202ENST00000370361 PEBP4Q96S96 227 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms