RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 BLOC1S5Q8TDH9 187 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 PDCD6IPQ8WUM4 868 aaKnown RBP24.04■■□□□ 1.44
SNX3-203ENST00000368979 NXPE3Q969Y0 559 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 CHFRQ96EP1 664 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 ATP13A3Q9H7F0 1226 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 UGT1A7Q9HAW7 530 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 UGT1A10Q9HAW8 530 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 UGT1A8Q9HAW9 530 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 C20orf96Q9NUD7 363 aaPredicted RBP24.04■■□□□ 1.44
SNX3-203ENST00000368979 ELOVL2Q9NXB9 296 aa24.04■■□□□ 1.44
SNX3-203ENST00000368979 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.04■■□□□ 1.443e-9■■■■□ 25.5
SNX3-203ENST00000368979 HECAQ9UBI9 543 aaPredicted RBP24.04■■□□□ 1.44
SNX3-203ENST00000368979 ARNTP27540 789 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 GKP32189 559 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 NNMTP40261 264 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 EIF2DP41214 584 aaKnown RBP24.03■■□□□ 1.44
SNX3-203ENST00000368979 ARCN1P48444 511 aaKnown RBP24.03■■□□□ 1.44
SNX3-203ENST00000368979 CCNHP51946 323 aaPredicted RBP24.03■■□□□ 1.44
SNX3-203ENST00000368979 ARMC12Q5T9G4 340 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 EMC10Q5UCC4 262 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 Q6ZVU0 165 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 TRABD2AQ86V40 505 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 RYBPQ8N488 228 aaPredicted RBP24.03■■□□□ 1.44
SNX3-203ENST00000368979 TERB1Q8NA31 727 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 TTC8Q8TAM2 541 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 PEX13Q92968 403 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 CPEB1Q9BZB8 566 aaKnown RBP24.03■■□□□ 1.44
SNX3-203ENST00000368979 ZFATQ9P243 1243 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 SLC17A6Q9P2U8 582 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 RIMKLBQ9ULI2 386 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 PCDHB9Q9Y5E1 797 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 SPO11Q9Y5K1 396 aa24.03■■□□□ 1.44
SNX3-203ENST00000368979 FOXO6A8MYZ6 492 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 WASH3PC4AMC7 463 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 FAM155BO75949 473 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 PIRTP0C851 137 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 PAMP19021 973 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 SERPINA4P29622 427 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 GRIA4P48058 902 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 RPL26P61254 145 aaKnown RBP24.02■■□□□ 1.44
SNX3-203ENST00000368979 ACVR1Q04771 509 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 CNGA3Q16281 694 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 NAIF1Q69YI7 327 aaPredicted RBP24.02■■□□□ 1.44
SNX3-203ENST00000368979 DPY19L3Q6ZPD9 716 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 OR13J1Q8NGT2 312 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 OR2A12Q8NGT7 310 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 PIH1D2Q8WWB5 315 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 RPL26L1Q9UNX3 145 aaKnown RBP24.02■■□□□ 1.44
SNX3-203ENST00000368979 ACTL7BQ9Y614 415 aa24.02■■□□□ 1.44
SNX3-203ENST00000368979 IQANK1A0A1B0GTG1 560 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 TTC34A8MYJ7 566 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 POP4O95707 220 aaKnown RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 SP100P23497 879 aaPredicted RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 HPDP32754 393 aaPredicted RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 GYS2P54840 703 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 SMAD4Q13485 552 aaKnown RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 SMAD1Q15797 465 aaKnown RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 ITPRIPL2Q3MIP1 535 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 HSP90AA5PQ58FG0 334 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 TEDDM1Q5T9Z0 273 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 PACS1Q6VY07 963 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 KDM7AQ6ZMT4 941 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 TAOK1Q7L7X3 1001 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 UBE2ZQ9H832 354 aaPredicted RBP24.01■■□□□ 1.43
SNX3-203ENST00000368979 ARL5AQ9Y689 179 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 SZT2Q5T011 3432 aa24.01■■□□□ 1.43
SNX3-203ENST00000368979 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24■■□□□ 1.43
SNX3-203ENST00000368979 TIMM44O43615 452 aa24■■□□□ 1.43
SNX3-203ENST00000368979 VAPBO95292 243 aa24■■□□□ 1.43
SNX3-203ENST00000368979 KRT15P19012 456 aa24■■□□□ 1.43
SNX3-203ENST00000368979 SLC8A1P32418 973 aa24■■□□□ 1.43
SNX3-203ENST00000368979 PPP2R2AP63151 447 aa24■■□□□ 1.43
SNX3-203ENST00000368979 CBX1P83916 185 aa24■■□□□ 1.43
SNX3-203ENST00000368979 GRM3Q14832 879 aa24■■□□□ 1.43
SNX3-203ENST00000368979 CNTN4Q8IWV2 1026 aa24■■□□□ 1.43
SNX3-203ENST00000368979 KDM1BQ8NB78 822 aa24■■□□□ 1.43
SNX3-203ENST00000368979 MDGA1Q8NFP4 955 aa24■■□□□ 1.43
SNX3-203ENST00000368979 ECHDC3Q96DC8 303 aa24■■□□□ 1.43
SNX3-203ENST00000368979 SMIM14Q96QK8 99 aa24■■□□□ 1.43
SNX3-203ENST00000368979 SLC8A2Q9UPR5 921 aa24■■□□□ 1.43
SNX3-203ENST00000368979 KCTD3Q9Y597 815 aa24■■□□□ 1.43
SNX3-203ENST00000368979 PSAT1Q9Y617 370 aa24■■□□□ 1.43
SNX3-203ENST00000368979 MBTPS2O43462 519 aa24■■□□□ 1.43
SNX3-203ENST00000368979 BNIP3LO60238 219 aa24■■□□□ 1.43
SNX3-203ENST00000368979 SIN3BO75182 1162 aa24■■□□□ 1.43
SNX3-203ENST00000368979 CRTAMO95727 393 aa24■■□□□ 1.43
SNX3-203ENST00000368979 KCNA5P22460 613 aa24■■□□□ 1.43
SNX3-203ENST00000368979 SERPINB9P50453 376 aa24■■□□□ 1.43
SNX3-203ENST00000368979 RAD51Q06609 339 aa24■■□□□ 1.43
SNX3-203ENST00000368979 TAF1AQ15573 450 aaPredicted RBP24■■□□□ 1.43
SNX3-203ENST00000368979 SRRM1Q8IYB3 904 aaKnown RBP24■■□□□ 1.43
SNX3-203ENST00000368979 CHST14Q8NCH0 376 aa24■■□□□ 1.43
SNX3-203ENST00000368979 AGAP2Q99490 1192 aa24■■□□□ 1.43
SNX3-203ENST00000368979 CPNE1Q99829 537 aa24■■□□□ 1.43
SNX3-203ENST00000368979 ZDHHC6Q9H6R6 413 aa24■■□□□ 1.43
SNX3-203ENST00000368979 IARS2Q9NSE4 1012 aaKnown RBP24■■□□□ 1.43
SNX3-203ENST00000368979 SENP1Q9P0U3 644 aa24■■□□□ 1.43
SNX3-203ENST00000368979 AURKAO14965 403 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 BMP1P13497 986 aa23.99■■□□□ 1.43
SNX3-203ENST00000368979 PSMA3P25788 255 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms