RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ST3GAL5Q9UNP4 418 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 FRMPD4Q14CM0 1322 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 TNS2Q63HR2 1409 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 CATP04040 527 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 MAPKAPK3Q16644 382 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 UGCGQ16739 394 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 ALG11Q2TAA5 492 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 FIBCD1Q8N539 461 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 SETD6Q8TBK2 473 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 CERS2Q96G23 380 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 FCRL4Q96PJ5 515 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 WRAP53Q9BUR4 548 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 YDJCA8MPS7 323 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 SCGNO76038 276 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 HNMTP50135 292 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 WASHC2DQ5SRD0 308 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 CIR1Q86X95 450 aaPredicted RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 IRF6O14896 467 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 PDE9AO76083 593 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 MZT2AQ6P582 158 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 LZTR1Q8N653 840 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 C18orf25Q96B23 403 aaPredicted RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 PANX1Q96RD7 426 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 PORCNQ9H237 461 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 A0A0A0MRY4 1105 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 RASGRP1O95267 797 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 EVX2Q03828 476 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 LINGO4Q6UY18 593 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 LDB1Q86U70 411 aaPredicted RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 SPATA13Q96N96 652 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 WDR18Q9BV38 432 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 C2orf49Q9BVC5 232 aaPredicted RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 ASB7Q9H672 318 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 C1QTNF3-AMACRE9PGA6 284 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 CHRNGP07510 517 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 SNRPB2P08579 225 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 ELNP15502 786 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 GABRR2P28476 465 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 CXorf57Q6NSI4 855 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 LNX1Q8TBB1 728 aaPredicted RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 GSTK1Q9Y2Q3 226 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 MEGF6O75095 1541 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 LIASO43766 372 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 TPST2O60704 377 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 TGFB3P10600 412 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 NEK6Q9HC98 313 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 ELFN1P0C7U0 828 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 PSMD5Q16401 504 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 LRRC73Q5JTD7 316 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 TAF8Q7Z7C8 310 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 ULK2Q8IYT8 1036 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 STK40Q8N2I9 435 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 PHF11Q9UIL8 331 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 A0A1W2PQ67 120 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 AREL1O15033 823 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 NOS1APO75052 506 aaPredicted RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 FADS2O95864 444 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 RAVER1Q8IY67 606 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 ADCY4Q8NFM4 1077 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 KAT2AQ92830 837 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 SLC25A23Q9BV35 468 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 SGK2Q9HBY8 427 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 NDRG2Q9UN36 371 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 NRP2O60462 931 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 MAPTP10636 758 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 PSMD7P51665 324 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 UGT2B15P54855 530 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 ABATP80404 500 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 SQLEQ14534 574 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 GPR142Q7Z601 462 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 TMPRSS11BQ86T26 416 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 MAP4K3Q8IVH8 894 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 LMLNQ96KR4 655 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 PNPOQ9NVS9 261 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 MGRN1O60291 552 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 SASH3O75995 380 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 PSMD4P55036 377 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 ADARP55265 1226 aaKnown RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 CYP4F8P98187 520 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 USP4Q13107 963 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 MTX3Q5HYI7 312 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 GPR107Q5VW38 600 aa18.23■□□□□ 0.51
SNX27-202ENST00000368841 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.23■□□□□ 0.51
SNX27-202ENST00000368841 ERBB2P04626 1255 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 MC1RQ01726 317 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 NRSN1Q8IZ57 195 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 SLC35C1Q96A29 364 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 FAIM2Q9BWQ8 316 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 B3GNT5Q9BYG0 378 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 ATAD3AQ9NVI7 634 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 SUCOQ9UBS9 1254 aaKnown RBP18.22■□□□□ 0.51
SNX27-202ENST00000368841 ALADP13716 330 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 RHBDF2Q6PJF5 856 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 GPRIN3Q6ZVF9 776 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
SNX27-202ENST00000368841 TEX47Q8TBZ9 253 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms