RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LGMNQ99538 433 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 FAM118BQ9BPY3 351 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 C19orf43Q9BQ61 176 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 ACE2Q9BYF1 805 aaPredicted RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 SLC39A8Q9C0K1 460 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 SIK2Q9H0K1 926 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 GBA3Q9H227 469 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 CDC42EP4Q9H3Q1 356 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ETNK1Q9HBU6 452 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 ARNT2Q9HBZ2 717 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 RAB6BQ9NRW1 208 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 GOLGA6AQ9NYA3 693 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 EURLQ9NYK6 297 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 IPO11Q9UI26 975 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 XPO7Q9UIA9 1087 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 MBD1Q9UIS9 605 aaPredicted RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 LSM7Q9UK45 103 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ANGPTL2Q9UKU9 493 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 AGO1Q9UL18 857 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 ATP8A1Q9Y2Q0 1164 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 AAR2Q9Y312 384 aaKnown RBP8.91□□□□□ -0.98
SNX27-201ENST00000368838 TEX264Q9Y6I9 313 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 CHD6Q8TD26 2715 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 PTPRBP23467 1997 aa8.91□□□□□ -0.98
SNX27-201ENST00000368838 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 TBC1D3BA6NDS4 549 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 KHNYNO15037 678 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 RRP9O43818 475 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 PRMT3O60678 531 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 PRAMEF11O60813 436 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 RAMP2O60895 175 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 TULP3O75386 442 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ANXA9O76027 345 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ALDH1A2O94788 518 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 METTL18O95568 372 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 AP2A1O95782 977 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 IVLP07476 585 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CCNB1P14635 433 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ETS1P14921 441 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 PMLP29590 882 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 KIR2DL1P43626 348 aaPredicted RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 TNNT3P45378 269 aaPredicted RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 ILF2Q12905 390 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 SLC29A2Q14542 456 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 INO80DQ53TQ3 878 aaPredicted RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 DNAJC21Q5F1R6 531 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 DENND2CQ68D51 928 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 RWDD4Q6NW29 188 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 TPGS1Q6ZTW0 290 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CHSY1Q86X52 802 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ATPAF2Q8N5M1 289 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CNTD1Q8N815 330 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ATP11CQ8NB49 1132 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 HJURPQ8NCD3 748 aaPredicted RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 CCDC110Q8TBZ0 833 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 PEX13Q92968 403 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 IGSF8Q969P0 613 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 SIGLEC10Q96LC7 697 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ACOX2Q99424 681 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CCDC77Q9BR77 488 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 STMN4Q9H169 189 aaPredicted RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 SLC25A51Q9H1U9 297 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 SLC6A17Q9H1V8 727 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 PDFQ9HBH1 243 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 TMBIM4Q9HC24 238 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CD93Q9NPY3 652 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 TMEM74BQ9NUR3 256 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 DNAAF2Q9NVR5 837 aaKnown RBP8.9□□□□□ -0.98
SNX27-201ENST00000368838 NINJ2Q9NZG7 142 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 MARK1Q9P0L2 795 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 TBC1D14Q9P2M4 693 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 HCN2Q9UL51 889 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 VANGL2Q9ULK5 521 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 ACTL7BQ9Y614 415 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 CFAP47Q6ZTR5 3102 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 DOCK9Q9BZ29 2069 aa8.9□□□□□ -0.98
SNX27-201ENST00000368838 A0A087WUV0 522 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 RASA4BC9J798 803 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 NEDD8-MDP1E9PL57 170 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 RASA4O43374 803 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 KDELR3O43731 214 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 CDH16O75309 829 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 HMBSP08397 361 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 ITPKAP23677 461 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 CORO1AP31146 461 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 SLC6A4P31645 630 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 CD68P34810 354 aaPredicted RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 PHBP35232 272 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 GGCXP38435 758 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 P2RY2P41231 377 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 GRIA2P42262 883 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 NPY2RP49146 381 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 PAPOLAP51003 745 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 MMP16P51512 607 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 SLC18A1P54219 525 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 BASP1P80723 227 aaKnown RBP8.89□□□□□ -0.99
SNX27-201ENST00000368838 GAD2Q05329 585 aa8.89□□□□□ -0.99
SNX27-201ENST00000368838 SLC20A2Q08357 652 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms