RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 UNKQ9C0B0 810 aaKnown RBP12.5□□□□□ -0.41
TPR-201ENST00000367478 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 PRLP01236 227 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 CCR3P51677 355 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 SMU1Q2TAY7 513 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 TCEAL6Q6IPX3 200 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 FBXL19Q6PCT2 694 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 RAB26Q9ULW5 256 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 MAN2B2Q9Y2E5 1009 aa12.5□□□□□ -0.41
TPR-201ENST00000367478 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 RPA3P35244 121 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 BUD31P41223 144 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 GRHL2Q6ISB3 625 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ANO7Q6IWH7 933 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 GJB7Q6PEY0 223 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 LRRC69Q6ZNQ3 347 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 GPRIN3Q6ZVF9 776 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PSTKQ8IV42 348 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 C17orf50Q8WW18 174 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 FAM151AQ8WW52 585 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ELP3Q9H9T3 547 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PCP4L1A6NKN8 68 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 TFECO14948 347 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 CBX6O95503 412 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 E2F2Q14209 437 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 NEPROQ6NW34 567 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PNPT1Q8TCS8 783 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 TRNT1Q96Q11 434 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 KBTBD4Q9NVX7 518 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 IFT80Q9P2H3 777 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 GPN3Q9UHW5 284 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 CARD8Q9Y2G2 431 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 MATN2O00339 956 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PTGS2P35354 604 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PTPN5P54829 565 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ZNF697Q5TEC3 545 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 DEF8Q6ZN54 512 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 SYNPO2Q9UMS6 1093 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 SLC27A6Q9Y2P4 619 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 NPTX2P47972 431 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 DNAJB7Q7Z6W7 309 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 RNF148Q8N7C7 305 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 TAS2R7Q9NYW3 318 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 RAP2CQ9Y3L5 183 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 FAM172BPA6NC97 362 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 AFTPHQ6ULP2 937 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 RFXANKO14593 260 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 FMO4P31512 558 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 SREBF1P36956 1147 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ELP6Q0PNE2 266 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PDK4Q16654 411 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 C4orf46Q504U0 113 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 OVOS1Q6IE37 1185 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 PANX1Q96RD7 426 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ISCA1Q9BUE6 129 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ANKZF1Q9H8Y5 726 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 GDF3Q9NR23 364 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ZNF208O43345 1280 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ATP6V0D1P61421 351 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ZNF720Q7Z2F6 126 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 MRPL9Q9BYD2 267 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 APOL3O95236 402 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 SSTR1P30872 391 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 RPL21P46778 160 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 CCSAPQ6IQ19 270 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 APTXQ7Z2E3 356 aaKnown RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
TPR-201ENST00000367478 OR8H1Q8NGG4 311 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 GULP1Q9UBP9 304 aa12.49□□□□□ -0.41
TPR-201ENST00000367478 ECHS1P30084 290 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 PSEN1P49768 467 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 MAPK10P53779 464 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 CNSTQ6PJW8 725 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 FAM98AQ8NCA5 519 aaKnown RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 CCDC107Q8WV48 283 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 KLK14Q9P0G3 267 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 KCNE2Q9Y6J6 123 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ZNF609O15014 1411 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 AP5Z1O43299 807 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 EIF4BP23588 611 aaKnown RBP12.48□□□□□ -0.41
TPR-201ENST00000367478 ASMTP46597 345 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 RASGEF1BQ0VAM2 473 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ANKRD26P1Q6NSI1 321 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TMEM86AQ8N2M4 240 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ASB7Q9H672 318 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 ATP13A3Q9H7F0 1226 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 TMEM44Q2T9K0 475 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 GPR180Q86V85 440 aa12.48□□□□□ -0.41
TPR-201ENST00000367478 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms