RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 C15orf59Q2T9L4 293 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ZNF75CPQ92670 426 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 COPS5Q92905 334 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 RAPSNQ13702 412 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 GALNT3Q14435 633 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 GRB14Q14449 540 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 GPR158Q5T848 1215 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 JAZF1Q86VZ6 243 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ANKRD52Q8NB46 1076 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 PPCDCQ96CD2 204 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 OMA1Q96E52 524 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 COPS8Q99627 209 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ZFP14Q9HCL3 533 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 GMPPBQ9Y5P6 360 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 DIP2AQ14689 1571 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 A0A087WXM4 84 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 NFATC1O95644 943 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 TBX2Q13207 712 aaPredicted RBP15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 XKR4Q5GH76 650 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 DEF8Q6ZN54 512 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 GCNT7Q6ZNI0 430 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 NYAP1Q6ZVC0 841 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 ATCAYQ86WG3 371 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 NRSN1Q8IZ57 195 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 POP5Q969H6 163 aaKnown RBP15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 ERGIC3Q9Y282 383 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 MYO3AQ8NEV4 1616 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 PPIBP23284 216 aaKnown RBP15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 ARFIP1P53367 373 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC12A3P55017 1021 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 FKBP1BP68106 108 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 ACAP2Q15057 778 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 ANKRD7Q92527 254 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 NRXN1Q9ULB1 1477 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 F8VP50 259 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 GLRA2P23416 452 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CDH5P33151 784 aaPredicted RBP15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CBFBQ13951 182 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CDKAL1Q5VV42 579 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CERS2Q96G23 380 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 COQ7Q99807 217 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CXorf56Q9H5V9 222 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 RASSF1Q9NS23 344 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 CFAP97Q9P2B7 532 aa15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 MRPS17Q9Y2R5 130 aaKnown RBP15.77■□□□□ 0.12
NUCKS1-201ENST00000367142 GJB6O95452 261 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 VIPP01282 170 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 MASP1P48740 699 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 SMCO1Q147U7 214 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 PSRC1Q6PGN9 363 aaPredicted RBP15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 MAB21L3Q8N8X9 362 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 FRMD6Q96NE9 622 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 ANKRD27Q96NW4 1050 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 DEFB118Q96PH6 123 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 GRIP2Q9C0E4 1043 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 CNGB3Q9NQW8 809 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 MARK1Q9P0L2 795 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 IQCMA0A1B0GVH7 501 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 USP46P62068 366 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 NPNTQ6UXI9 565 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 C17orf64Q86WR6 236 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 TOP6BLQ8N6T0 577 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 NAT16Q8N8M0 369 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 HIPK3Q9H422 1215 aa15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.77■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM92AA1XBS5 289 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 LDOC1O95751 146 aaPredicted RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 TFEBP19484 476 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ADRA1DP25100 572 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 RAB10P61026 200 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ELP6Q0PNE2 266 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 PLA2G4EQ3MJ16 856 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 GPR180Q86V85 440 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 SLC35C1Q96A29 364 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 DGCR6LQ9BY27 220 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 NOL6Q9H6R4 1146 aaKnown RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 RNF19AQ9NV58 838 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 LOC100506127A0A0U1RQW1 187 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 FGBP02675 491 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 SNRPB2P08579 225 aaKnown RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 MC4RP32245 332 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CACNA2D1P54289 1103 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 PIGZQ86VD9 579 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 MRPL57Q9BQC6 102 aaKnown RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 DSN1Q9H410 356 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 PSMD13Q9UNM6 376 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 FZD1Q9UP38 647 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 COLEC10Q9Y6Z7 277 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CLUHO75153 1309 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 FGF1P05230 155 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 PSMD8P48556 350 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 AKIRIN2Q53H80 203 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 CAPN13Q6MZZ7 669 aaPredicted RBP15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 DNAAF5Q86Y56 855 aa15.76■□□□□ 0.11
NUCKS1-201ENST00000367142 PCDH20Q8N6Y1 951 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms