RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 FAM91A1Q658Y4 838 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 NEPROQ6NW34 567 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 RASSF6Q6ZTQ3 369 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 GPR142Q7Z601 462 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 RNF180Q86T96 592 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 FAM35AQ86V20 835 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 SNX32Q86XE0 403 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PSMA8Q8TAA3 256 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 OSBPL10Q9BXB5 764 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 WDR41Q9HAD4 459 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 NMRK1Q9NWW6 199 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 TK2O00142 265 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CLOCKO15516 846 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZBTB48P10074 688 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 KCNE1P15382 129 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 AOC1P19801 751 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCNG1P51959 295 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 SLC25A3Q00325 362 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 HERC3Q15034 1050 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZFP69Q49AA0 526 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 KBTBD2Q8IY47 623 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZDHHC14Q8IZN3 488 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CENPLQ8N0S6 344 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PTCD3Q96EY7 689 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 MECRQ9BV79 373 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CINPQ9BW66 212 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZNF222Q9UK12 451 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 FBXW11Q9UKB1 542 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 Q9Y3F1 56 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 SH3BP1Q9Y3L3 701 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 RAMP2O60895 175 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PIK3R1P27986 724 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 AVPR1AP37288 418 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 MAGEA10P43363 369 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 TUBP50607 506 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ARHGAP1Q07960 439 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZNF177Q13360 481 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 MGAT5BQ3V5L5 792 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCDC157Q569K6 752 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 GET4Q7L5D6 327 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 OSBPL6Q9BZF3 934 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZYG11BQ9C0D3 744 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 POLR1BQ9H9Y6 1135 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ARHGEF4Q9NR80 690 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 IMPAD1Q9NX62 359 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 RAB26Q9ULW5 256 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 BAIAP2Q9UQB8 552 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 TMED5Q9Y3A6 229 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 SUPT3HB4E1H0 165 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 METTL18O95568 372 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 HIST1H2AGP0C0S8 130 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 HIST1H2ADP20671 130 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 DAOAP59103 153 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 RALGDSQ12967 914 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 C6orf10Q5SRN2 563 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 NCBP2-AS2Q69YL0 99 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 TXNRD3NBQ6F5E7 133 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ASRGL1Q7L266 308 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PGAM4Q8N0Y7 254 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 HIST1H2AHQ96KK5 128 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PCYT2Q99447 389 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 HIST1H2AJQ99878 128 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 H2AFJQ9BTM1 129 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 C9orf16Q9BUW7 83 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 PTPRHQ9HD43 1115 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 LSM7Q9UK45 103 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 WBP11Q9Y2W2 641 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 BTAF1O14981 1849 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 MRASO14807 208 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 HSMCR30P0CW71 290 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCNA2P20248 432 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 MCCD1P59942 119 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 ITGA7Q13683 1181 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 FAM110CQ1W6H9 321 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 AGKQ53H12 422 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 WSCD1Q658N2 575 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 LRRC8DQ7L1W4 858 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 DHFR2Q86XF0 187 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 MIER2Q8N344 545 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 UBR7Q8N806 425 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 STAG3L4Q8TBR4 150 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 OSCP1Q8WVF1 389 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 FBXO32Q969P5 355 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 EGFL8Q99944 293 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 ACBD6Q9BR61 282 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 POMKQ9H5K3 350 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 CD274Q9NZQ7 290 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 PKP3Q9Y446 797 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 A0A1W2PQ72 361 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 CARNS1A5YM72 827 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 SYNDIG1LA6NDD5 238 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 EFCAB10A6NFE3 127 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 XPAP23025 273 aaPredicted RBP5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 NAGLUP54802 743 aa5.39□□□□□ -1.55
CDC42BPA-204ENST00000366767 MRPS6P82932 125 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms