RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MROH8Q9H579 483 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ACTR8Q9H981 624 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CRLS1Q9UJA2 301 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 DYTNA2CJ06 578 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 HUNKP57058 714 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 PPP1R8Q12972 351 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TAF1CQ15572 869 aaPredicted RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 REP15Q6BDI9 236 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CNTD1Q8N815 330 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 HAPLN2Q9GZV7 340 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 RAD21L1Q9H4I0 556 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TIMMDC1Q9NPL8 285 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 ABCB10Q9NRK6 738 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
COL6A1-201ENST00000361866 COPG1Q9Y678 874 aaKnown RBP13.98□□□□□ -0.17
COL6A1-201ENST00000361866 TAF1P21675 1872 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 MFN2O95140 757 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 SCNN1GP51170 649 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 EGFLAMQ63HQ2 1017 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 NCBP2-AS2Q69YL0 99 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 GCNT7Q6ZNI0 430 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 C1orf21Q9H246 121 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 SLC8A2Q9UPR5 921 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 FAM32AQ9Y421 112 aaKnown RBP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 NUP98P52948 1817 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 LOC100506127A0A0U1RQW1 187 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 TOR1BO14657 336 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 SEC22BO75396 215 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 ETV4P43268 484 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 CCNIQ14094 377 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 C9orf57Q5W0N0 161 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 XKR5Q6UX68 686 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 SYTL1Q8IYJ3 562 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 OR7A2PQ8NGA2 310 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 RDH11Q8TC12 318 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 DUSP16Q9BY84 665 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 POLG2Q9UHN1 485 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 MYO1DO94832 1006 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 CDH3P22223 829 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 YWHAQP27348 245 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 THPOP40225 353 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 DPYSL2Q16555 572 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 C15orf39Q6ZRI6 1047 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 EID3Q8N140 333 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 ATP6V0D2Q8N8Y2 350 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 FCRL2Q96LA5 508 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
COL6A1-201ENST00000361866 DNAAF2Q9NVR5 837 aaKnown RBP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 UXTQ9UBK9 157 aaPredicted RBP13.97□□□□□ -0.17
COL6A1-201ENST00000361866 H3BMM5 538 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 CYP4B1P13584 511 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 HLA-DPA1P20036 260 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 PTPN9P43378 593 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 CCNG1P51959 295 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ITGA7Q13683 1181 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 PTPRNQ16849 979 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 BROXQ5VW32 411 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 GALNT18Q6P9A2 607 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 CHST15Q7LFX5 561 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-201ENST00000361866 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 OR9Q1Q8NGQ5 310 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 VPS33AQ96AX1 596 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 C19orf60Q96EN9 201 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ZFYVE19Q96K21 471 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 SEMA3CQ99985 751 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ADI1Q9BV57 179 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 HMG20AQ9NP66 347 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 SMIM28A0A1B0GU29 152 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 SOWAHBA6NEL2 793 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 YJEFN3A6XGL0 299 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 J3QRK9 145 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ALOX12P18054 663 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 CES1P23141 567 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 TTKP33981 857 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ZNF157P51786 506 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-201ENST00000361866 DEFA1P59665 94 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 DEFA3P59666 94 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 BEX3Q00994 111 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 TNFAIP8L3Q5GJ75 292 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 OR52E8Q6IFG1 317 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 GLB1LQ6UWU2 654 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 TERB1Q8NA31 727 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ELMO1Q92556 727 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 FBXL8Q96CD0 374 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 XYLT2Q9H1B5 865 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 GLOD4Q9HC38 313 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 BPIFA1Q9NP55 256 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ATAD3AQ9NVI7 634 aa13.96□□□□□ -0.17
COL6A1-201ENST00000361866 ZBTB14O43829 449 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 ASLP04424 464 aa13.96□□□□□ -0.18
COL6A1-201ENST00000361866 MTHFD1P11586 935 aaKnown RBP13.96□□□□□ -0.18
COL6A1-201ENST00000361866 ATP6V1E1P36543 226 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms