RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LSM12Q3MHD2 195 aaKnown RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 GPR158Q5T848 1215 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 NCBP2-AS2Q69YL0 99 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 CRYBG2Q8N1P7 616 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 PTCD3Q96EY7 689 aaKnown RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 MRPL9Q9BYD2 267 aaKnown RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 FAM126AQ9BYI3 521 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 TRIM45Q9H8W5 580 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 TMPRSS4Q9NRS4 437 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 DPPA5A6NC42 116 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 LPOP22079 712 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 HSPA14Q0VDF9 509 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 PRKG2Q13237 762 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 TPGS1Q6ZTW0 290 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 TSPAN14Q8NG11 270 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 PIWIL1Q96J94 861 aaKnown RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 HPS4Q9NQG7 708 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 PCDHB9Q9Y5E1 797 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 MOXD2PA6NHM9 499 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 E9PAM4 449 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 IVDP26440 423 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 DSC2Q02487 901 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 RALGDSQ12967 914 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
SCAF1-201ENST00000360565 AFTPHQ6ULP2 937 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 B3GNT9Q6UX72 402 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 WDTC1Q8N5D0 677 aa16.42■□□□□ 0.22
SCAF1-201ENST00000360565 HS6ST1O60243 411 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TBX10O75333 385 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 S100A3P33764 101 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 CSTF3Q12996 717 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 CRY1Q16526 586 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 MTFMTQ96DP5 389 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 OTUB1Q96FW1 271 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ZFP14Q9HCL3 533 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 EIF2B3Q9NR50 452 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 GMIPQ9P107 970 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 SLC7A8Q9UHI5 535 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 LEF1Q9UJU2 399 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 RGS14O43566 566 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 MLYCDO95822 493 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 PCNAP12004 261 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 POU1F1P28069 291 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 DUSP4Q13115 394 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 STARD3Q14849 445 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 C16orf72Q14CZ0 275 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TRIM16LQ309B1 348 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ZIK1Q3SY52 487 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 UBAP2Q5T6F2 1119 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 RELL1Q8IUW5 271 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 MCOLN3Q8TDD5 553 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 EMID1Q96A84 441 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TCAF1Q9Y4C2 921 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 IGSF6O95976 241 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 CDH5P33151 784 aaPredicted RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TIGD2Q4W5G0 525 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 GLMNQ92990 594 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 UGT2B28Q9BY64 529 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 PAIP1Q9H074 479 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 INVSQ9Y283 1065 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 PRRC2BQ5JSZ5 2229 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 DHRS12A0PJE2 317 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ARL5CA6NH57 179 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 KCNU1A8MYU2 1149 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 CHRNA4P43681 627 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 FLT3LGP49771 235 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ZNF132P52740 706 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 FBXO48Q5FWF7 155 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 GPRIN3Q6ZVF9 776 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 EID3Q8N140 333 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 SCAMP5Q8TAC9 235 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 MED8Q96G25 268 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 BTN2A3PQ96KV6 586 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 PANX3Q96QZ0 392 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
SCAF1-201ENST00000360565 AGO1Q9UL18 857 aaKnown RBP16.41■□□□□ 0.22
SCAF1-201ENST00000360565 ITM2AO43736 263 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 CHRNGP07510 517 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 MSH3P20585 1137 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 CDC16Q13042 620 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 BTG3Q14201 252 aaPredicted RBP16.4■□□□□ 0.22
SCAF1-201ENST00000360565 CLEC6AQ6EIG7 209 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 ANKRD23Q86SG2 305 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 ITIH5Q86UX2 942 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 YAF2Q8IY57 180 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 PQLC3Q8N755 202 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 OR4K2Q8NGD2 314 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 MYH1P12882 1939 aa16.4■□□□□ 0.22
SCAF1-201ENST00000360565 MATN3O15232 486 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms