RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 OR12D3Q9UGF7 316 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 PRPF19Q9UMS4 504 aaKnown RBP9.73□□□□□ -0.85
CUX1-203ENST00000360264 PRKG2Q13237 762 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MYBPC3Q14896 1274 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 XKR4Q5GH76 650 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 OR7A2PQ8NGA2 310 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 VPS35Q96QK1 796 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 IGFLR1Q9H665 355 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 GLUD1P00367 558 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 HTR7P34969 479 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 DCLRE1AQ6PJP8 1040 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 ACOT12Q8WYK0 555 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 MUC13Q9H3R2 512 aa9.73□□□□□ -0.85
CUX1-203ENST00000360264 SUV39H1O43463 412 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 DNAJA2O60884 412 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 GRB14Q14449 540 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 DDI2Q5TDH0 399 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 STK32CQ86UX6 486 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 SLC4A11Q8NBS3 891 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 HSPA14Q0VDF9 509 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 S100ZQ8WXG8 99 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 OSGEPQ9NPF4 335 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 XPNPEP3Q9NQH7 507 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 MTRRQ9UBK8 725 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 H3BM21 787 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 NR2F1P10589 423 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 RAB10P61026 200 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 KLHL26Q53HC5 615 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PCBD2Q9H0N5 130 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 FANCFQ9NPI8 374 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PHPT1Q9NRX4 125 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 NWD1Q149M9 1564 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 GCNT7Q6ZNI0 430 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 MPP4Q96JB8 637 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 SEMA3GQ9NS98 782 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PNPLA3Q9NST1 481 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PCDHB1Q9Y5F3 818 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 BTNL10A8MVZ5 291 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 LIN7AO14910 233 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 SSNA1O43805 119 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PRR5P85299 388 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 CPTPQ5TA50 214 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 NAIF1Q69YI7 327 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 ZNF540Q8NDQ6 660 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 ERVW-1Q9UQF0 538 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 SAGE2PA6NJ88 616 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PECAM1P16284 738 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 MAMLD1Q13495 774 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 TAPT1Q6NXT6 567 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 RTL4Q6ZR62 310 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 OR4A15Q8NGL6 344 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 NEK7Q8TDX7 302 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 DPF2Q92785 391 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 FUT8Q9BYC5 575 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 EHD3Q9NZN3 535 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 GRM6O15303 877 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 APODP05090 189 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 GRIA3P42263 894 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 MEA1Q16626 185 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 NOA1Q8NC60 698 aaKnown RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 OR52K1Q8NGK4 314 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PPCDCQ96CD2 204 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 ABI3Q9P2A4 366 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 TSPAN3O60637 253 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 TNFRSF8P28908 595 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 BRMS1LQ5PSV4 323 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 TCHHL1Q5QJ38 904 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 GPALPP1Q8IXQ4 340 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 EFHD2Q96C19 240 aaPredicted RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 GPATCH2LQ9NWQ4 482 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 KCTD5Q9NXV2 234 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 MYPNQ86TC9 1320 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 CTDNEP1O95476 244 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 PROCP04070 461 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 IDH2P48735 452 aaKnown RBP9.72□□□□□ -0.85
CUX1-203ENST00000360264 WSCD1Q658N2 575 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 ETNPPLQ8TBG4 499 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
CUX1-203ENST00000360264 DCXO43602 365 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 PSMB4P28070 264 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 WDR12Q9GZL7 423 aaKnown RBP9.71□□□□□ -0.85
CUX1-203ENST00000360264 MCUBQ9NWR8 336 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 LRIG2O94898 1065 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ADSLP30566 484 aaPredicted RBP9.71□□□□□ -0.85
CUX1-203ENST00000360264 BMT2Q1RMZ1 405 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 C16orf59Q7L2K0 433 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 REXO1L1PQ8IX06 675 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 SCUBE3Q8IX30 993 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 SLC5A5Q92911 643 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 L2HGDHQ9H9P8 463 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 COPS7AQ9UBW8 275 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 A0A087X0B3 334 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 IFNA6P05013 189 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 TMEM119Q4V9L6 283 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ZNF563Q8TA94 476 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 RBMXL2O75526 392 aaKnown RBP9.71□□□□□ -0.85
CUX1-203ENST00000360264 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.85
CUX1-203ENST00000360264 ERICH5Q6P6B1 374 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms