RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 PTAR1Q7Z6K3 402 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 YTHDF3Q7Z739 585 aaKnown RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 SDCCAG8Q86SQ7 713 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 PPP1R14CQ8TAE6 165 aa21.09■□□□□ 0.97
FAM3A-202ENST00000359889 PDCD6IPQ8WUM4 868 aaKnown RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 SREK1Q8WXA9 508 aaKnown RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 E2F7Q96AV8 911 aa21.09■□□□□ 0.97
FAM3A-202ENST00000359889 ZNF707Q96C28 371 aaPredicted RBP21.09■□□□□ 0.97
FAM3A-202ENST00000359889 TSSK1BQ9BXA7 367 aa21.09■□□□□ 0.97
FAM3A-202ENST00000359889 OBSL1O75147 1896 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 FAM95CA0A1B0GW59 222 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 ANKRD66B4E2M5 251 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 PLIN3O60664 434 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 IGSF6O95976 241 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 PENKP01210 267 aaPredicted RBP21.08■□□□□ 0.97
FAM3A-202ENST00000359889 APOA4P06727 396 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 BPGMP07738 259 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 COL6A2P12110 1019 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 STMN1P16949 149 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 BGNP21810 368 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 LEPRP48357 1165 aaKnown RBP21.08■□□□□ 0.97
FAM3A-202ENST00000359889 CLCN5P51795 746 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 USP4Q13107 963 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 ZNF77Q15935 545 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 C6orf89Q6UWU4 347 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 PAF1Q8N7H5 531 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 TSPAN17Q96FV3 270 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 SLCO1B3Q9NPD5 702 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 SIRPGQ9P1W8 387 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 MSRAQ9UJ68 235 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 ARL5AQ9Y689 179 aa21.08■□□□□ 0.97
FAM3A-202ENST00000359889 NEDD8-MDP1E9PL57 170 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 GABRB3P28472 473 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 RAB10P61026 200 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 TMPRSS15P98073 1019 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 POU4F1Q01851 419 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 SULT2A1Q06520 285 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 DMC1Q14565 340 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 PITRM1Q5JRX3 1037 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ARMC12Q5T9G4 340 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 RNF187Q5TA31 235 aaPredicted RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 TMEM25Q86YD3 366 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CILP2Q8IUL8 1156 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ARID3BQ8IVW6 561 aaPredicted RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CELF5Q8N6W0 485 aaKnown RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ELMO2Q96JJ3 720 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 DNAJC1Q96KC8 554 aaKnown RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 TBATAQ96M53 351 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CAB39LQ9H9S4 337 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 SPHK2Q9NRA0 654 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 NLE1Q9NVX2 485 aaPredicted RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 SLC25A13Q9UJS0 675 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 YBX2Q9Y2T7 364 aaKnown RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CHD5Q8TDI0 1954 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 PRAMEF12O95522 483 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 MT-CO1P00395 513 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 PRLP01236 227 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 PIRTP0C851 137 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CEBPBP17676 345 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 RPL26P61254 145 aaKnown RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 BCL2L1Q07817 233 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 TRAF2Q12933 501 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 DUSP6Q16828 381 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ATXN7L2Q5T6C5 722 aaPredicted RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CCDC91Q7Z6B0 441 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 KIAA1958Q8N8K9 716 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 GPATCH11Q8N954 259 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 GPR150Q8NGU9 434 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ING5Q8WYH8 240 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 PPP2R3CQ969Q6 453 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 TM6SF2Q9BZW4 377 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CERS4Q9HA82 394 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 FBXO6Q9NRD1 293 aaPredicted RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 CLEC4EQ9ULY5 219 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 RPL26L1Q9UNX3 145 aaKnown RBP21.07■□□□□ 0.96
FAM3A-202ENST00000359889 ACOT9Q9Y305 439 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 KCTD3Q9Y597 815 aa21.07■□□□□ 0.96
FAM3A-202ENST00000359889 K7ERQ8 282 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 HAUS5O94927 633 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 IL1BP01584 269 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 PROCP04070 461 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 HOXB8P17481 243 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-202ENST00000359889 LPOP22079 712 aaPredicted RBP21.06■□□□□ 0.96
FAM3A-202ENST00000359889 ALDH3A1P30838 453 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 GRIA4P48058 902 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 NRIP1P48552 1158 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 ARSDP51689 593 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 KPNA2P52292 529 aaKnown RBP21.06■□□□□ 0.96
FAM3A-202ENST00000359889 IRX4P78413 519 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 SF3A3Q12874 501 aaKnown RBP eCLIP21.06■□□□□ 0.96
FAM3A-202ENST00000359889 RAB30Q15771 203 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 CHI3L2Q15782 390 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 C16orf46Q6P387 395 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 OTOAQ7RTW8 1153 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 ADGRD2Q7Z7M1 963 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 SLC41A1Q8IVJ1 513 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 OR4L1Q8NH43 312 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 SLC2A11Q9BYW1 496 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 SFXN1Q9H9B4 322 aa21.06■□□□□ 0.96
FAM3A-202ENST00000359889 CATSPERZQ9NTU4 200 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms