RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CCL22O00626 93 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 UBDO15205 165 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 AP1G1O43747 822 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MGEA5O60502 916 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MT-CO1P00395 513 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 OR4Q2P0C623 313 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 AKR1A1P14550 325 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 HDCP19113 662 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 RALGDSQ12967 914 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 STX5Q13190 355 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PSMD5Q16401 504 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 AGKQ53H12 422 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 HECTD2Q5U5R9 776 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PIK3R6Q5UE93 754 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MRPL10Q7Z7H8 261 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 LDB1Q86U70 411 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 TICAM1Q8IUC6 712 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 OR13J1Q8NGT2 312 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 OR6P1Q8NGX9 317 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 HMGCLL1Q8TB92 370 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 NAT14Q8WUY8 206 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MTG1Q9BT17 334 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 NOL6Q9H6R4 1146 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 MEAF6Q9HAF1 191 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CACNA2D2Q9NY47 1150 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ABI2Q9NYB9 513 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 UTP6Q9NYH9 597 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 UBAP1Q9NZ09 502 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 APPL1Q9UKG1 709 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PADI3Q9ULW8 664 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PCDHGB4Q9UN71 923 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PCDHGB5Q9Y5G0 923 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PCDHGA7Q9Y5G6 932 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 DOCK4Q8N1I0 1966 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 E7ENX8 843 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PSMD12O00232 456 aaPredicted RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 TNFRSF10BO14763 440 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 RBP1P09455 135 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 TSPAN8P19075 237 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 RGS2P41220 211 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 LEPRP48357 1165 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 RENBPP51606 427 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PRAMEP78395 509 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 DSC2Q02487 901 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 TUSC3Q13454 348 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 C11orf91Q3C1V1 193 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 C6orf52Q5T4I8 152 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CLEC6AQ6EIG7 209 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CD300LGQ6UXG3 332 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 PIM3Q86V86 326 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 CILP2Q8IUL8 1156 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 LRRC49Q8IUZ0 686 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SLC22A9Q8IVM8 553 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ANKRD49Q8WVL7 239 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 NCSTNQ92542 709 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 EXT2Q93063 718 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ATP6V1E2Q96A05 226 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 HMCESQ96FZ2 354 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 IMP4Q96G21 291 aaKnown RBP8.64□□□□□ -1.03
RFX3-202ENST00000358730 PCDHAC1Q9H158 963 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 ALG9Q9H6U8 611 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SP110Q9HB58 689 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 MRGBPQ9NV56 204 aa8.64□□□□□ -1.03
RFX3-202ENST00000358730 SMIM31A0A1B0GVY4 71 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 J3KR12 359 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 GPC4O75487 556 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 RNASEH2AO75792 299 aaKnown RBP8.63□□□□□ -1.03
RFX3-202ENST00000358730 OR6B1O95007 311 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 CLPTM1O96005 669 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 PEX11BO96011 259 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 THPOP40225 353 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 RAB27AP51159 221 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 FKBP1BP68106 108 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 YWHAHQ04917 246 aaPredicted RBP8.63□□□□□ -1.03
RFX3-202ENST00000358730 SLC10A7Q0GE19 358 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 GK3PQ14409 553 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 GPR158Q5T848 1215 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 MARC1Q5VT66 337 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 SDHAF4Q5VUM1 108 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 IL23RQ5VWK5 629 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 UNC93B1Q9H1C4 597 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 GSTO2Q9H4Y5 243 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 ARNT2Q9HBZ2 717 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 VCX3AQ9NNX9 186 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 OSER1Q9NX31 292 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 MTF2Q9Y483 593 aaPredicted RBP8.63□□□□□ -1.03
RFX3-202ENST00000358730 COMMD3-BMI1R4GMX3 469 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 ATP6AP2A0A1C7CYW4 349 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
RFX3-202ENST00000358730 OR51F1A6NGY5 319 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 FBP2O00757 339 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 ATP6AP2O75787 350 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 SUPT7LO94864 414 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 CELF2O95319 508 aaKnown RBP8.63□□□□□ -1.03
RFX3-202ENST00000358730 TNFAIP8O95379 198 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 SLC4A1P02730 911 aa8.63□□□□□ -1.03
RFX3-202ENST00000358730 HAPLN1P10915 354 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms