RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 KLHL35Q6PF15 583 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CHSY3Q70JA7 882 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF554Q86TJ5 538 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 METTL23Q86XA0 190 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 MIER2Q8N344 545 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 KBTBD7Q8WVZ9 684 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 LPPQ93052 612 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 HDAC10Q969S8 669 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ASB9Q96DX5 294 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TSPAN17Q96FV3 270 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PLGRKTQ9HBL7 147 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TIMMDC1Q9NPL8 285 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RIMS3Q9UJD0 308 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 OAZ3Q9UMX2 235 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SNX5Q9Y5X3 404 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 WNK3Q9BYP7 1800 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ZBTB42B2RXF5 422 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 EI24O14681 340 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 NCAM2O15394 837 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 IPO13O94829 963 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RHOBTB1O94844 696 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 BCL10O95999 233 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PGK1P00558 417 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CD86P42081 329 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PIM3Q86V86 326 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 OSTM1Q86WC4 334 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RALGPS2Q86X27 583 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 OR2T34Q8NGX1 318 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 OR2T3Q8NH03 318 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GAD1Q99259 594 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ARMC7Q9H6L4 198 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CACNA2D2Q9NY47 1150 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RNF112Q9ULX5 631 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 MTF2Q9Y483 593 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 LOXHD1Q8IVV2 1947 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ANKRD33BA6NCL7 494 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TCAF2A6NFQ2 919 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 LRRC14BA6NHZ5 514 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SOCS2O14508 198 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF195O14628 629 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 HTRA2O43464 458 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KDM1AO60341 852 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CYP2B6P20813 491 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 HADHAP40939 763 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 MAGEA3P43357 314 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 WNT3AP56704 352 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 RHDQ02161 417 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PRKCQQ04759 706 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TIGD2Q4W5G0 525 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SDHAF4Q5VUM1 108 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 RDH11Q8TC12 318 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 C12orf43Q96C57 262 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 FAR2Q96K12 515 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TEKT5Q96M29 485 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 GPR22Q99680 433 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ADI1Q9BV57 179 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZFYVE28Q9HCC9 887 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 EIF2B3Q9NR50 452 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SLC8A2Q9UPR5 921 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ANGPTL3Q9Y5C1 460 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF831Q5JPB2 1677 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PSMD3O43242 534 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KATNA1O75449 491 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KCNH1O95259 989 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 LDLRP01130 860 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 POMCP01189 267 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PNPLA4P41247 253 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ECT2LQ008S8 904 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 GNA12Q03113 381 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CBX3Q13185 183 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 NR1D2Q14995 579 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 ZNF789Q5FWF6 425 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 OGFOD2Q6N063 350 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM214Q6NUQ4 689 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SAPCD2Q86UD0 394 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CPNE9Q8IYJ1 553 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 CALML6Q8TD86 181 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 STYXQ8WUJ0 223 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SKA2Q8WVK7 121 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 FIG4Q92562 907 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KCNA7Q96RP8 456 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 TBCDQ9BTW9 1192 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 THUMPD3Q9BV44 507 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SIPA1L1O43166 1804 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PCNTO95613 3336 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 A8MT66 165 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PRKCGP05129 697 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 KCNA5P22460 613 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 MAGEA6P43360 314 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 EIF2B2P49770 351 aaKnown RBP6.6□□□□□ -1.35
CSDE1-203ENST00000358528 PRKAA2P54646 552 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 LILRA4P59901 499 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 SULT2A1Q06520 285 aa6.6□□□□□ -1.35
CSDE1-203ENST00000358528 DPYSQ14117 519 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms