RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 PTPN1P18031 435 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 GRK2P25098 689 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ADH6P28332 368 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 LRPAP1P30533 357 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 IDUAP35475 653 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 MSX2P35548 267 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 HPCAL1P37235 193 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 GABRB2P47870 512 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 P2RX3P56373 397 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 PSMC6P62333 389 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 RBP5P82980 135 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CREMQ03060 361 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CENPCQ03188 943 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 SLC18A2Q05940 514 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 MBTD1Q05BQ5 628 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CDK18Q07002 472 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 LAMTOR4Q0VGL1 99 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 NFATC3Q12968 1075 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 EIF2B5Q13144 721 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 NME3Q13232 169 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TUBB3Q13509 450 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 PTK2BQ14289 1009 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 RAB39AQ14964 217 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CHI3L2Q15782 390 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 INAVAQ3KP66 663 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 MGAT5BQ3V5L5 792 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 BOLA3Q53S33 107 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 FAM182AQ5T1J6 154 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ATAD3BQ5T9A4 648 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 UBE2UQ5VVX9 321 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 SLC27A1Q6PCB7 646 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CDHR3Q6ZTQ4 885 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 SH2D5Q6ZV89 423 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 MRPL10Q7Z7H8 261 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 DSG4Q86SJ6 1040 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 SIX6OS1Q8N1H7 587 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 MYO1HQ8N1T3 1032 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 FIBCD1Q8N539 461 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TOP6BLQ8N6T0 577 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TERB1Q8NA31 727 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 OR6J1Q8NGC5 347 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 GIPC2Q8TF65 315 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TFB1MQ8WVM0 346 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ATL1Q8WXF7 558 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TRIB2Q92519 343 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CMTM5Q96DZ9 223 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 FEM1CQ96JP0 617 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ZNF597Q96LX8 424 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 PCYT2Q99447 389 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 APOL6Q9BWW8 343 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 OSBPL11Q9BXB4 747 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 NPLQ9BXD5 320 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 IRF2BPLQ9H1B7 796 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 TRIT1Q9H3H1 467 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ACSS3Q9H6R3 686 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 COQ10BQ9H8M1 238 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 RPF1Q9H9Y2 349 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 GDAP2Q9NXN4 497 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 RCOR3Q9P2K3 495 aaPredicted RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 DNMT3BQ9UBC3 853 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 FETUBQ9UGM5 382 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 UBQLN1Q9UMX0 589 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 APOBEC2Q9Y235 224 aaKnown RBP4.03□□□□□ -1.76
CNGA1-201ENST00000358519 ANGPTL3Q9Y5C1 460 aa4.03□□□□□ -1.76
CNGA1-201ENST00000358519 CLUHO75153 1309 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8SH3BPF8 625 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 GOLGA8MH3BSY2 632 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 AP3B1O00203 1094 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CCRL2O00421 344 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CYB561D2O14569 222 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 HNRNPDLO14979 420 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 HOXC11O43248 304 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 FAM189A1O60320 539 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CLPXO76031 633 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 EOMESO95936 686 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ASS1P00966 412 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PFKMP08237 780 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ZNF865P0CJ78 1059 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CYBAP13498 195 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ETS1P14921 441 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CCNA2P20248 432 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 TGM1P22735 817 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 BDNFP23560 247 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 MAP4P27816 1152 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 S100A5P33763 92 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 RFC1P35251 1148 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 MLLT10P55197 1068 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PHC1P78364 1004 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PPP2R2BQ00005 443 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 ZNF33AQ06730 810 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CACNB2Q08289 660 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 GPS1Q13098 491 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 KLF1Q13351 362 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CAPSQ13938 189 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 FLOT2Q14254 428 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PIGHQ14442 188 aaPredicted RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 PPP2R5DQ14738 602 aa4.02□□□□□ -1.77
CNGA1-201ENST00000358519 MAPRE1Q15691 268 aaKnown RBP4.02□□□□□ -1.77
CNGA1-201ENST00000358519 CARTPTQ16568 116 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms