RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 BLOC1S5Q8TDH9 187 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 FRS2Q8WU20 508 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 CYB5D2Q8WUJ1 264 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 PEX13Q92968 403 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 RMDN1Q96DB5 314 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 AGAP2Q99490 1192 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 RPP25Q9BUL9 199 aaKnown RBP17.17■□□□□ 0.34
TPM1-205ENST00000357980 GTSE1Q9NYZ3 720 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.17■□□□□ 0.343e-7■■□□□ 13.4
TPM1-205ENST00000357980 SENP1Q9P0U3 644 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 DEC1Q9P2X7 70 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 SPO11Q9Y5K1 396 aa17.17■□□□□ 0.34
TPM1-205ENST00000357980 A0A1W2PPM1 405 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 ARNTLO00327 626 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 VAPBO95292 243 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PIGNO95427 931 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 ASLP04424 464 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 DLDP09622 509 aaKnown RBP17.16■□□□□ 0.34
TPM1-205ENST00000357980 PAMP19021 973 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 LAMB3Q13751 1172 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 QPCTQ16769 361 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 MYLK3Q32MK0 819 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 GRAMD4Q6IC98 578 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PACS1Q6VY07 963 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 Q6ZVU0 165 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 CNTN4Q8IWV2 1026 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PLPP6Q8IY26 295 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 MICALL1Q8N3F8 863 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 ARFGAP2Q8N6H7 521 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PDCD6IPQ8WUM4 868 aaKnown RBP17.16■□□□□ 0.34
TPM1-205ENST00000357980 CHFRQ96EP1 664 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 TUBGCP5Q96RT8 1024 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 CPNE1Q99829 537 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 CIPCQ9C0C6 399 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 ATP13A3Q9H7F0 1226 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 CD207Q9UJ71 328 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 RIMKLBQ9ULI2 386 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PCDHB9Q9Y5E1 797 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 ARL5AQ9Y689 179 aa17.16■□□□□ 0.34
TPM1-205ENST00000357980 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 SIN3BO75182 1162 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 ATP5BP06576 529 aaKnown RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 SRPRAP08240 638 aaKnown RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 BMP1P13497 986 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 OPRD1P41143 372 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 SERPINB9P50453 376 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 CCNHP51946 323 aaPredicted RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 RPL26P61254 145 aaKnown RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 BCL2L1Q07817 233 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 ACCSLQ4AC99 568 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 CARD16Q5EG05 197 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 ARMC12Q5T9G4 340 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 DPY19L3Q6ZPD9 716 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 MTSS1LQ765P7 747 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 PIH1D2Q8WWB5 315 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 NXPE3Q969Y0 559 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 SMIM14Q96QK8 99 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 MCMBPQ9BTE3 642 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 CPEB1Q9BZB8 566 aaKnown RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 TRABDQ9H4I3 376 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 ELOVL2Q9NXB9 296 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 GGT7Q9UJ14 662 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 RPL26L1Q9UNX3 145 aaKnown RBP17.15■□□□□ 0.34
TPM1-205ENST00000357980 KCTD3Q9Y597 815 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 PRUNE2Q8WUY3 3088 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 TICRRQ7Z2Z1 1910 aa17.15■□□□□ 0.34
TPM1-205ENST00000357980 ANHXE9PGG2 379 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 GOLGA8TH3BQL2 631 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 AURKAO14965 403 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 KRT37O76014 449 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 KRT38O76015 456 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 CNTFP26441 200 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 GDI1P31150 447 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 SLC8A1P32418 973 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 GJA4P35212 333 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 GP5P40197 560 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 GRIA4P48058 902 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 ZNF140P52738 457 aaPredicted RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 HTR4Q13639 388 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 NAIF1Q69YI7 327 aaPredicted RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 OR2A12Q8NGT7 310 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 FAM161BQ96MY7 647 aa17.14■□□□□ 0.34
TPM1-205ENST00000357980 CNOT10Q9H9A5 744 aaKnown RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.34
TPM1-205ENST00000357980 SCN8AQ9UQD0 1980 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 TTC34A8MYJ7 566 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 WASH3PC4AMC7 463 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 POP4O95707 220 aaKnown RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 BRAFP15056 766 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 PSMA3P25788 255 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 SERPINA4P29622 427 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 ARSDP51689 593 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 KDSRQ06136 332 aa17.14■□□□□ 0.33
TPM1-205ENST00000357980 EIF4HQ15056 248 aaKnown RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 TAF1AQ15573 450 aaPredicted RBP17.14■□□□□ 0.33
TPM1-205ENST00000357980 SH2D5Q6ZV89 423 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms