RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C5AR1P21730 350 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 P2RY2P41231 377 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 ERCC6LQ2NKX8 1250 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 CFAP58Q5T655 872 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 FAM46CQ5VWP2 391 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 CAND1Q86VP6 1230 aaKnown RBP25.54■■□□□ 1.68
SSBP3-202ENST00000357475 HDDC3Q8N4P3 179 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 GDF3Q9NR23 364 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 GGT7Q9UJ14 662 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 ITM2BQ9Y287 266 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 EML5Q05BV3 1969 aa25.54■■□□□ 1.68
SSBP3-202ENST00000357475 A8MX80 341 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 EPOP01588 193 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 DNTTP04053 509 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 CXCL12P48061 93 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 MORF4L2Q15014 288 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 UGP2Q16851 508 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 TSSK4Q6SA08 328 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PCGF5Q86SE9 256 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PGBD3Q8N328 593 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 RMDN1Q96DB5 314 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 TPSD1Q9BZJ3 242 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 CASS4Q9NQ75 786 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 BCCIPQ9P287 314 aaKnown RBP eCLIP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 ARIH1Q9Y4X5 557 aaPredicted RBP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 SPO11Q9Y5K1 396 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 KMT2EQ8IZD2 1858 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 ANKRD66B4E2M5 251 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 CA4P22748 312 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 MAGEA9P43362 315 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 CARSP49589 748 aaKnown RBP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 DRG2P55039 364 aaKnown RBP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PLTPP55058 493 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 DMWDQ09019 674 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 MSLNQ13421 630 aaPredicted RBP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PIP5KL1Q5T9C9 394 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 AGBL4Q5VU57 503 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 NAPEPLDQ6IQ20 393 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 CCDC70Q6NSX1 233 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 BRAT1Q6PJG6 821 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PPP1R21Q6ZMI0 780 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 ERN2Q76MJ5 926 aaKnown RBP25.53■■□□□ 1.68
SSBP3-202ENST00000357475 TTC7BQ86TV6 843 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 AGGF1Q8N302 714 aaeCLIP25.53■■□□□ 1.682e-6■□□□□ 9.7
SSBP3-202ENST00000357475 FBXL6Q8N531 539 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 FBXO25Q8TCJ0 367 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 IFT81Q8WYA0 676 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 ART4Q93070 314 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 SERPINB12Q96P63 405 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 PCDH12Q9NPG4 1184 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 ZDHHC18Q9NUE0 388 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 FBXL12Q9NXK8 326 aa25.53■■□□□ 1.68
SSBP3-202ENST00000357475 LRRK1Q38SD2 2015 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 UPK3BL1B0FP48 263 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 UPK3BL2E5RIL1 263 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 RNASEH2AO75792 299 aaKnown RBP25.52■■□□□ 1.68
SSBP3-202ENST00000357475 ADRB3P13945 408 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 ECHS1P30084 290 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 CCR3P51677 355 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 EPHB1P54762 984 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 DENND2CQ68D51 928 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.52■■□□□ 1.68
SSBP3-202ENST00000357475 BMP8AQ7Z5Y6 402 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 HOOK3Q86VS8 718 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 MCUQ8NE86 351 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 HCAR2Q8TDS4 363 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 SPOCK2Q92563 424 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 PPP1R16AQ96I34 528 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 IER2Q9BTL4 223 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 ADGRE3Q9BY15 652 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 HDAC8Q9BY41 377 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 DYRK4Q9NR20 520 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 PHTF1Q9UMS5 762 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 SHOC2Q9UQ13 582 aa25.52■■□□□ 1.68
SSBP3-202ENST00000357475 A0A0J9YYE9 177 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 NPIPB15A6NHN6 443 aaPredicted RBP25.51■■□□□ 1.67
SSBP3-202ENST00000357475 BANF1O75531 89 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 APBB3O95704 486 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 TRBC1P01850 177 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 HLA-DPA1P20036 260 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 HNF1BP35680 557 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 GRIA4P48058 902 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 TPMTP51580 245 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 NEK3P51956 506 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 SESN2P58004 480 aaPredicted RBP25.51■■□□□ 1.67
SSBP3-202ENST00000357475 TAS2R38P59533 333 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 CDK16Q00536 496 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 CALCOCO2Q13137 446 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 MSS51Q4VC12 460 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 FNBP1LQ5T0N5 605 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 CERCAMQ5T4B2 595 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 FBXL19Q6PCT2 694 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 FAM124AQ86V42 546 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 RASSF3Q86WH2 238 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 GANCQ8TET4 914 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 UBXN4Q92575 508 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 ARNT2Q9HBZ2 717 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 BPTFQ12830 3046 aa25.51■■□□□ 1.67
SSBP3-202ENST00000357475 AURKAO14965 403 aa25.5■■□□□ 1.67
SSBP3-202ENST00000357475 FGF1P05230 155 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms