RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 PLD5Q8N7P1 536 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 SPC24Q8NBT2 197 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 CCNYQ8ND76 341 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 OR13H1Q8NG92 308 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 TPCN2Q8NHX9 752 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 KCTD5Q9NXV2 234 aa20.53■□□□□ 0.88
CHRD-203ENST00000356534 PJA2O43164 708 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 MMP20O60882 483 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 TRIM16O95361 564 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 CCNB1P14635 433 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 NR2C2P49116 596 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 NAP1L1P55209 391 aaKnown RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 SIM1P81133 766 aaPredicted RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 PPIDQ08752 370 aaKnown RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 AGERQ15109 404 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 TFDP3Q5H9I0 405 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 RAD9BQ6WBX8 426 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 GLRX5Q86SX6 157 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 SPATS2Q86XZ4 545 aaKnown RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 PGBD5Q8N414 524 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 RHBDD1Q8TEB9 315 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 RNF25Q96BH1 459 aaPredicted RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 KLF6Q99612 283 aaPredicted RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 WRAP53Q9BUR4 548 aaKnown RBP20.52■□□□□ 0.88
CHRD-203ENST00000356534 CA5BQ9Y2D0 317 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 HYOU1Q9Y4L1 999 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 HEY1Q9Y5J3 304 aa20.52■□□□□ 0.88
CHRD-203ENST00000356534 KCNK3O14649 394 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 CBFA2T3O75081 653 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 ZRANB2O95218 330 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHRD-203ENST00000356534 MAP3K6O95382 1288 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 ELFN1P0C7U0 828 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 CYP2A6P11509 494 aaPredicted RBP20.51■□□□□ 0.87
CHRD-203ENST00000356534 C6P13671 934 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 TGM2P21980 687 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 CLDN2P57739 230 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 MAXP61244 160 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 YPEL5P62699 121 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 FAM193AP78312 1265 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 ITKQ08881 620 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 PTK2BQ14289 1009 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 ARMC12Q5T9G4 340 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 MFSD7Q6UXD7 560 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 Q6ZSR6 202 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 DPPA4Q7L190 304 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 EXD1Q8NHP7 514 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 BAHD1Q8TBE0 780 aaPredicted RBP20.51■□□□□ 0.87
CHRD-203ENST00000356534 PDCD6IPQ8WUM4 868 aaKnown RBP20.51■□□□□ 0.87
CHRD-203ENST00000356534 SEMA3CQ99985 751 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 NOD2Q9HC29 1040 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 GPR27Q9NS67 375 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 RBM22Q9NW64 420 aaKnown RBP eCLIP20.51■□□□□ 0.871e-28■■□□□ 13.9
CHRD-203ENST00000356534 PHTF1Q9UMS5 762 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 APOBEC2Q9Y235 224 aaKnown RBP20.51■□□□□ 0.87
CHRD-203ENST00000356534 PTPRBP23467 1997 aa20.51■□□□□ 0.87
CHRD-203ENST00000356534 H3BM21 787 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 LZTS3O60299 673 aaPredicted RBP20.5■□□□□ 0.87
CHRD-203ENST00000356534 PMLP29590 882 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 CDKN2BP42772 138 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 THOP1P52888 689 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 IL9RQ01113 521 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 KIF5AQ12840 1032 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 HS1BP3Q53T59 392 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 SPOCD1Q6ZMY3 1216 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 USP45Q70EL2 814 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 PARGQ86W56 976 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 ZSWIM9Q86XI8 627 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 TMEM139Q8IV31 216 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 CCDC50Q8IVM0 306 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 RCOR2Q8IZ40 523 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 ACRBPQ8NEB7 543 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 SAP25Q8TEE9 199 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 BMFQ96LC9 184 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 FTSJ1Q9UET6 329 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 DNPEPQ9ULA0 475 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 TTLL3Q9Y4R7 772 aa20.5■□□□□ 0.87
CHRD-203ENST00000356534 CCDC66A2RUB6 948 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 POM121BA6NF01 834 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 RAD51BO15315 384 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 IGFALSP35858 605 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 CETN2P41208 172 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 LIG3P49916 1009 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 PFN3P60673 137 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 COPS2P61201 443 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 HNRNPKP61978 463 aaKnown RBP eCLIP20.49■□□□□ 0.874e-15■■■□□ 17
CHRD-203ENST00000356534 IFI35P80217 286 aaPredicted RBP20.49■□□□□ 0.87
CHRD-203ENST00000356534 SLC10A2Q12908 348 aaPredicted RBP20.49■□□□□ 0.87
CHRD-203ENST00000356534 LRRC14Q15048 493 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 PPP2R5EQ16537 467 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 TAZQ16635 292 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 SYCE1Q8N0S2 351 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 TP53I13Q8NBR0 393 aaPredicted RBP20.49■□□□□ 0.87
CHRD-203ENST00000356534 CCDC112Q8NEF3 446 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 KIAA1524Q8TCG1 905 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 CENPTQ96BT3 561 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 CAMK1GQ96NX5 476 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 OLFM3Q96PB7 478 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 ANGPTL2Q9UKU9 493 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 PCDHGC4Q9Y5F7 938 aa20.49■□□□□ 0.87
CHRD-203ENST00000356534 SPTY2D1-AS1A0A0U1RR47 76 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms