RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RAD51AP1Q96B01 352 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PANX1Q96RD7 426 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 FKBP14Q9NWM8 211 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 SASH3O75995 380 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CDH3P22223 829 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 TBX2Q13207 712 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PABPC1LQ4VXU2 614 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CCSAPQ6IQ19 270 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 AADACL2Q6P093 401 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 OTOP1Q7RTM1 612 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CDYL2Q8N8U2 506 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 DPF3Q92784 378 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ATP13A3Q9H7F0 1226 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 RASSF1Q9NS23 344 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CLIC5Q9NZA1 410 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 DMTF1Q9Y222 760 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 AK5Q9Y6K8 562 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ARHGEF33A8MVX0 844 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 G3V2T6 193 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 MAGEB3O15480 346 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 SUV39H1O43463 412 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 SLC28A2O43868 658 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CBFA2T3O75081 653 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 LINC00032P0C843 101 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 IDO1P14902 403 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 AUHQ13825 339 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 C15orf59Q2T9L4 293 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 SLC30A10Q6XR72 485 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PARP8Q8N3A8 854 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 RHOBTB2Q9BYZ6 727 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 SUCOQ9UBS9 1254 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 DNMT3LQ9UJW3 386 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PACSIN3Q9UKS6 424 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF214Q9UL59 606 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CCNB1P14635 433 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF143P52747 638 aaPredicted RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ITPK1Q13572 414 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 NT5DC1Q5TFE4 455 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 INTS7Q9NVH2 962 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 POLLQ9UGP5 575 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 NDUFS2O75306 463 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PSEN2P49810 448 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 KCNA10Q16322 511 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 PDK4Q16654 411 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 UNC93AQ86WB7 457 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 MEIOBQ8N635 442 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 UROC1Q96N76 676 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 DUSP9Q99956 384 aaKnown RBP14.95□□□□□ -0.02
LMX1B-201ENST00000355497 FUCA2Q9BTY2 467 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 EURLQ9NYK6 297 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF780BQ9Y6R6 833 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 TSPOAP1O95153 1857 aa14.95□□□□□ -0.02
LMX1B-201ENST00000355497 CLTCL1P53675 1640 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 TRAV19A0A0A6YYK7 116 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ABHD14A-ACY1A0A1B0GW23 586 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ANKRD63C9JTQ0 380 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 LOC110117498-PIK3R3F6TDL0 507 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 NR2F6P10588 404 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SLC12A3P55017 1021 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 RCN3Q96D15 328 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 PCYOX1Q9UHG3 505 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SALL1Q9NSC2 1324 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 TBC1D3BA6NDS4 549 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 BUD23O43709 281 aaKnown RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 LRIG2O94898 1065 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SEMA3DO95025 777 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 CLUP10909 449 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 CYP4B1P13584 511 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 PPIBP23284 216 aaKnown RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 GABRB2P47870 512 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SWI5Q1ZZU3 235 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 TRAPPC12Q8WVT3 735 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 GSDMCQ9BYG8 508 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 CCDC59Q9P031 241 aaKnown RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 MFHAS1Q9Y4C4 1052 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 AP4B1Q9Y6B7 739 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 RFXANKO14593 260 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SLC9A3R1O14745 358 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 CASKO14936 926 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 UGT2B11O75310 529 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ACTR3P61158 418 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 MEA1Q16626 185 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 AAGABQ6PD74 315 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 AMIGO2Q86SJ2 522 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ADAMTSL2Q86TH1 951 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 KLHL32Q96NJ5 620 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 PDGFDQ9GZP0 370 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 BRD9Q9H8M2 597 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SRRM3A6NNA2 597 aaPredicted RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 CBX5P45973 191 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ZC3H12AQ5D1E8 599 aaKnown RBP14.94□□□□□ -0.02
LMX1B-201ENST00000355497 PIK3R6Q5UE93 754 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 TRPV1Q8NER1 839 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 ZYG11BQ9C0D3 744 aa14.94□□□□□ -0.02
LMX1B-201ENST00000355497 PFDN2Q9UHV9 154 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms