RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CBX4O00257 560 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 FGF10O15520 208 aaPredicted RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 OTCP00480 354 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 CYP4B1P13584 511 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 PBLDP30039 288 aaPredicted RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 CYP2C18P33260 490 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATP6V0D1P61421 351 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 C2orf69Q8N8R5 385 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 WDR48Q8TAF3 677 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 PIH1D2Q8WWB5 315 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 EHD1Q9H4M9 534 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 SETD4Q9NVD3 440 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 ARL15Q9NXU5 204 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 SCAF8Q9UPN6 1271 aaKnown RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 BTRCQ9Y297 605 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAM86B1E9PN63 330 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 H7C4K7 107 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 IL18Q14116 193 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 GPR162Q16538 588 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAM220AQ7Z4H9 259 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 GPR180Q86V85 440 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAM50BQ9Y247 325 aa12.77□□□□□ -0.36
SYNCRIP-201ENST00000355238 SETD1BQ9UPS6 1966 aaKnown RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 TULP3O75386 442 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 RPL38P63173 70 aaKnown RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 PHC1P78364 1004 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 CARTPTQ16568 116 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC9A4Q6AI14 798 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 GLYATQ6IB77 296 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 CUZD1Q86UP6 607 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 DIRAS2Q96HU8 199 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 SYT15Q9BQS2 421 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 POLR1EQ9GZS1 481 aaKnown RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 C2orf71A6NGG8 1288 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 SUV39H1O43463 412 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 SGTAO43765 313 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 NOS2P35228 1153 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 ACTR3P61158 418 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 KLHDC10Q6PID8 442 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 WDR55Q9H6Y2 383 aaPredicted RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 PDE10AQ9Y233 779 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 RNF225M0QZC1 329 aaPredicted RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 WWP2O00308 870 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 AIREO43918 545 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 NOMO3P69849 1222 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 HERC3Q15034 1050 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 RFWD3Q6PCD5 774 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 C12orf50Q8NA57 414 aaPredicted RBP12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 SMYD1Q8NB12 490 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 CPB2Q96IY4 423 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 KCNQ5Q9NR82 932 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 IL17RBQ9NRM6 502 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 MCUBQ9NWR8 336 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 VPS4AQ9UN37 437 aa12.77□□□□□ -0.37
SYNCRIP-201ENST00000355238 PDLIM1O00151 329 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 NDUFS2O75306 463 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 MPSTP25325 297 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 CHCHD6Q9BRQ6 235 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SNRNP25Q9BV90 132 aaKnown RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC22A2O15244 555 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ORC5O43913 435 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 NTRK1P04629 796 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TBX4P57082 545 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM92BQ6ZTR7 304 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TXNRD3Q86VQ6 643 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC34A3Q8N130 599 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SVOPLQ8N434 492 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 EDEM1Q92611 657 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 POMPQ9Y244 141 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 PIAS1O75925 651 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 FGFR1P11362 822 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TAS2R40P59535 323 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 BHLHB9Q6PI77 547 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMPRSS11AQ6ZMR5 421 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TRIM48Q8IWZ4 208 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 WNT8BQ93098 351 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 HAVCR1Q96D42 359 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 EXD2Q9NVH0 621 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ANKRD63C9JTQ0 380 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 BMT2Q1RMZ1 405 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM182BQ5T319 152 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms