RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ECSITQ9BQ95 431 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 ZBTB26Q9HCK0 441 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 UXTQ9UBK9 157 aaPredicted RBP22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 BCAP29Q9UHQ4 241 aa22.4■■□□□ 1.18
NKX2-1-201ENST00000354822 AURKAO14965 403 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 IPO13O94829 963 aaKnown RBP22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 TBX18O95935 607 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 PENKP01210 267 aaPredicted RBP22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 EPOP01588 193 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 NUDT2P50583 147 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 PRAMEP78395 509 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 TAF10Q12962 218 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 PEX6Q13608 980 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 SIRPB2Q5JXA9 342 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 IZUMO2Q6UXV1 221 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 MIB1Q86YT6 1006 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 KBTBD2Q8IY47 623 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 DSELQ8IZU8 1212 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 OR6P1Q8NGX9 317 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 CCDC124Q96CT7 223 aaKnown RBP22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 PPP1R36Q96LQ0 422 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 RPRD1AQ96P16 312 aaPredicted RBP22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 NDNQ99608 321 aa22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 POLR1EQ9GZS1 481 aaKnown RBP22.39■■□□□ 1.18
NKX2-1-201ENST00000354822 MIA3Q5JRA6 1907 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 SLC12A8A0AV02 714 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 CCDC166P0CW27 439 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 HOXB8P17481 243 aaPredicted RBP22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 ERFP50548 548 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 XIAPP98170 497 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 TMEM154Q6P9G4 183 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 PTAR1Q7Z6K3 402 aaPredicted RBP22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 ELAC1Q9H777 363 aaKnown RBP22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 EFCAB1Q9HAE3 211 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 SCOCQ9UIL1 159 aa22.39■■□□□ 1.17
NKX2-1-201ENST00000354822 MAGEA13PA6NCF6 341 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 BUD23O43709 281 aaKnown RBP22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 PDCD2Q16342 344 aaPredicted RBP22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 ZNF789Q5FWF6 425 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 KBTBD6Q86V97 674 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 ABI1Q8IZP0 508 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 SLC43A3Q8NBI5 491 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 SHKBP1Q8TBC3 707 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 HDAC10Q969S8 669 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 SPDL1Q96EA4 605 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 SGF29Q96ES7 293 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 PPP1R12CQ9BZL4 782 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 RETREG1Q9H6L5 497 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 S1PR4O95977 384 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 HLA-DPA1P20036 260 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 OR1E1P30953 314 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 GPR17Q13304 367 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 TCHHL1Q5QJ38 904 aaPredicted RBP22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 IFT43Q96FT9 208 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 ZNF599Q96NL3 588 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 CATSPER2Q96P56 530 aa22.38■■□□□ 1.17
NKX2-1-201ENST00000354822 ALDH2P05091 517 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 ATXN1LP0C7T5 689 aaKnown RBP22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 FGFR3P22607 806 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 ACVR1Q04771 509 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 RASIP1Q5U651 963 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 FAM45BPQ6NSW5 357 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 RNF135Q8IUD6 432 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 PGAM4Q8N0Y7 254 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 PGBD5Q8N414 524 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 TTC9BQ8N6N2 239 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 FAM45AQ8TCE6 357 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 GPR152Q8TDT2 470 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 FEM1CQ96JP0 617 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 TRMOQ9BU70 441 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 UNKQ9C0B0 810 aaKnown RBP22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 ZDHHC7Q9NXF8 308 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 GTSE1Q9NYZ3 720 aa22.37■■□□□ 1.17
NKX2-1-201ENST00000354822 A0A1W2PQ45 241 aaPredicted RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 A0A1W2PQY0 241 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 A8MT66 165 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 LDB2O43679 373 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 PRAMEF11O60813 436 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 SORBS2O94875 1100 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 FGF1P05230 155 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 RFTN1Q14699 578 aaPredicted RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 BNC2Q6ZN30 1099 aaPredicted RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 GATA6Q92908 595 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 PPP2R3CQ969Q6 453 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 G3BP2Q9UN86 482 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 DPPA5A6NC42 116 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 SDHDO14521 159 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 TRPA1O75762 1119 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 ART3Q13508 389 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 IHHQ14623 411 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 MGAT5BQ3V5L5 792 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 LHX8Q68G74 356 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 SDCCAG8Q86SQ7 713 aaPredicted RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 GPR150Q8NGU9 434 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 C2orf15Q8WU43 125 aaKnown RBP22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 SEMA3CQ99985 751 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 TRPC7Q9HCX4 862 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 STARD7Q9NQZ5 370 aa22.36■■□□□ 1.17
NKX2-1-201ENST00000354822 RIMKLBQ9ULI2 386 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms