RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 CDKN2DP55273 166 aa19.68■□□□□ 0.74
COL13A1-201ENST00000354547 TIGD7Q6NT04 549 aaPredicted RBP19.68■□□□□ 0.74
COL13A1-201ENST00000354547 KLC3Q6P597 504 aa19.68■□□□□ 0.74
COL13A1-201ENST00000354547 SMOC2Q9H3U7 446 aa19.68■□□□□ 0.74
COL13A1-201ENST00000354547 GMPR2Q9P2T1 348 aaKnown RBP19.68■□□□□ 0.74
COL13A1-201ENST00000354547 RIMS3Q9UJD0 308 aa19.68■□□□□ 0.74
COL13A1-201ENST00000354547 CAPN15O75808 1086 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 SOAT2O75908 522 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 LTA4HP09960 611 aaKnown RBP19.67■□□□□ 0.74
COL13A1-201ENST00000354547 XIAPP98170 497 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 YWHAHQ04917 246 aaPredicted RBP19.67■□□□□ 0.74
COL13A1-201ENST00000354547 PSMD5Q16401 504 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 MANEALQ5VSG8 457 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 TRPV1Q8NER1 839 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 HMGCLL1Q8TB92 370 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 SP110Q9HB58 689 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 PTGDR2Q9Y5Y4 395 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 HEATR9A2RTY3 570 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 PSMD12O00232 456 aaPredicted RBP19.67■□□□□ 0.74
COL13A1-201ENST00000354547 TNPO2O14787 897 aaKnown RBP19.67■□□□□ 0.74
COL13A1-201ENST00000354547 ZNF33AQ06730 810 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 MARC1Q5VT66 337 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 MTG1Q9BT17 334 aaPredicted RBP19.67■□□□□ 0.74
COL13A1-201ENST00000354547 TBC1D13Q9NVG8 400 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 VWA7Q9Y334 891 aa19.67■□□□□ 0.74
COL13A1-201ENST00000354547 PPP6CO00743 305 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 NELFEP18615 380 aaKnown RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 KPNA2P52292 529 aaKnown RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 MLLT6P55198 1093 aaPredicted RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 ARPP19P56211 112 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 CDKL1Q00532 357 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 TMEM207Q6UWW9 146 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 OR13J1Q8NGT2 312 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 PKMYT1Q99640 499 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 UXTQ9UBK9 157 aaPredicted RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 PRG3Q9Y2Y8 225 aaPredicted RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 LRRC14BA6NHZ5 514 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 PEX1O43933 1283 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 TADA2AO75478 443 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 AKR1A1P14550 325 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 HOXC8P31273 242 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 EIF4EBP2Q13542 120 aaPredicted RBP19.66■□□□□ 0.74
COL13A1-201ENST00000354547 KDELC1Q6UW63 502 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 BLOC1S5Q8TDH9 187 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 BTBD9Q96Q07 612 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 SLC25A51Q9H1U9 297 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 PCDHGA7Q9Y5G6 932 aa19.66■□□□□ 0.74
COL13A1-201ENST00000354547 A0A1B0GVG6 124 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 UNCXA6NJT0 531 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 UBFD1O14562 309 aaKnown RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 B4GALT3O60512 393 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 BCAS2O75934 225 aaPredicted RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 RGS2P41220 211 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 HK2P52789 917 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 MFN1Q8IWA4 741 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 EME1Q96AY2 570 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TBATAQ96M53 351 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 NYNRINQ9P2P1 1898 aaKnown RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 FBP2O00757 339 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TNFRSF10BO14763 440 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 USP46P62068 366 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TUSC3Q13454 348 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 LCA5Q86VQ0 697 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 SLC45A3Q96JT2 553 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 PRPF18Q99633 342 aaKnown RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 PRKD2Q9BZL6 878 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 BCAP29Q9UHQ4 241 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 LZTS1Q9Y250 596 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TRAF6Q9Y4K3 522 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 ACOT8O14734 319 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 SIX3O95343 332 aaPredicted RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 RENBPP51606 427 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 ARTNQ5T4W7 220 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 RAP1GAP2Q684P5 730 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 REP15Q6BDI9 236 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 AMIGO2Q86SJ2 522 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 ZNF280BQ86YH2 543 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 CILP2Q8IUL8 1156 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TTC9BQ8N6N2 239 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 EML4Q9HC35 981 aaKnown RBP19.65■□□□□ 0.74
COL13A1-201ENST00000354547 DSEQ9UL01 958 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 HTTP42858 3142 aa19.65■□□□□ 0.74
COL13A1-201ENST00000354547 TRIM38O00635 465 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 SOX11P35716 441 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 HUNKP57058 714 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 PFKPQ01813 784 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 ZFP1Q6P2D0 407 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 PTCD2Q8WV60 388 aaKnown RBP19.64■□□□□ 0.73
COL13A1-201ENST00000354547 LRTOMTQ8WZ04 291 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 MAELQ96JY0 434 aaKnown RBP19.64■□□□□ 0.73
COL13A1-201ENST00000354547 GRIP2Q9C0E4 1043 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 CACNA2D2Q9NY47 1150 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 EPS15L1Q9UBC2 864 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 SNX13Q9Y5W8 968 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 ARL5AQ9Y689 179 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 PRSS56P0CW18 603 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 HOXC13P31276 330 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 TBX4P57082 545 aa19.64■□□□□ 0.73
COL13A1-201ENST00000354547 GRM2Q14416 872 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms