RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 MRPL48Q96GC5 212 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 CCDC17Q96LX7 622 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 GAL3ST1Q99999 423 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP1-202ENST00000353411 RPS6KA6Q9UK32 745 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 STAP1Q9ULZ2 295 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CPQQ9Y646 472 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CRB1P82279 1406 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ASTN2O75129 1339 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 C5orf58C9J3I9 102 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 BCAS2O75934 225 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 IL18Q14116 193 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SSX2Q16385 188 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 UBE2UQ5VVX9 321 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 USP17L2Q6R6M4 530 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LINC00299Q6ZSB3 139 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PLCZ1Q86YW0 608 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SLC7A3Q8WY07 619 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 NACC2Q96BF6 587 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 KCTD15Q96SI1 283 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 HTATIP2Q9BUP3 242 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SPON1Q9HCB6 807 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ERVK-5Q9HDB9 667 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PCDHA11Q9Y5I1 949 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 FAM205AQ6ZU69 1335 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SHPRHQ149N8 1683 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TCRBV9S1A1TA0A576 114 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SPDYE2BA6NHP3 402 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PLOD2O00469 737 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 NUDT7P0C024 238 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SPDYE6P0CI01 402 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PTPN2P17706 415 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 HOXC8P31273 242 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 HOXD13P35453 343 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CD79BP40259 229 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RGS7P49802 495 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PCSK7Q16549 785 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 NEPROQ6NW34 567 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CYP20A1Q6UW02 462 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SPESP1Q6UW49 350 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LHFPL3Q86UP9 236 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TTC29Q8NA56 475 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 S100PBPQ96BU1 408 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RDH12Q96NR8 316 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TRNT1Q96Q11 434 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 CLPBQ9H078 707 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 IFT22Q9H7X7 185 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RGS18Q9NS28 235 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TNFRSF10DQ9UBN6 386 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZNF335Q9H4Z2 1342 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 IRGMA1A4Y4 181 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ATP6V1G2-DDX39BF2Z307 99 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 M0R233 179 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZNF3P17036 446 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 MYL9P24844 172 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RPL22P35268 128 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 NR2C2P49116 596 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 HADHBP55084 474 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 STILQ15468 1287 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ITSN1Q15811 1721 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CCDC88AQ3V6T2 1871 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ESCO2Q56NI9 601 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZDHHC24Q6UX98 284 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 FABP12A6NFH5 140 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 AP1G1O43747 822 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 CD72P21854 359 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 GRIA2P42262 883 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 JAK3P52333 1124 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DCAF6Q58WW2 860 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 IRF2BP2Q7Z5L9 587 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 FAM126BQ8IXS8 530 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SLC15A3Q8IY34 581 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 OFCC1Q8IZS5 231 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 OR6P1Q8NGX9 317 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 DEDD2Q8WXF8 326 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 LPGAT1Q92604 370 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 AURKBQ96GD4 344 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 LENG8Q96PV6 779 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 GFM1Q96RP9 751 aaKnown RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 ZNF334Q9HCZ1 680 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.05□□□□□ -1.6
SKP1-202ENST00000353411 APC2O95996 2303 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 C2orf71A6NGG8 1288 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 APOC4-APOC2K7ER74 178 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 VILLO15195 856 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SLITRK5O94991 958 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SGPL1O95470 568 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 APOC2P02655 101 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MYCLP12524 364 aaPredicted RBP5.05□□□□□ -1.6
SKP1-202ENST00000353411 HPCAL1P37235 193 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 UBE2SQ16763 222 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 WSCD2Q2TBF2 565 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 ARMCX2Q7L311 632 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MCOLN2Q8IZK6 566 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 TTYH2Q9BSA4 534 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 MECRQ9BV79 373 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 AP4E1Q9UPM8 1137 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 VPS9D1Q9Y2B5 631 aa5.05□□□□□ -1.6
SKP1-202ENST00000353411 SCN1AP35498 2009 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms