RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CAAP1Q9H8G2 361 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 CYLDQ9NQC7 956 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 CACNA2D2Q9NY47 1150 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 SELENONQ9NZV5 590 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 PACSIN3Q9UKS6 424 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 RWDD3Q9Y3V2 267 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 MFHAS1Q9Y4C4 1052 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 BNC2Q6ZN30 1099 aaPredicted RBP13.78□□□□□ -0.2
SMC6-201ENST00000351948 DIS3LQ8TF46 1054 aaKnown RBP13.78□□□□□ -0.2
SMC6-201ENST00000351948 SELENOMQ8WWX9 145 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 ASF1AQ9Y294 204 aa13.78□□□□□ -0.2
SMC6-201ENST00000351948 MTMR11A4FU01 709 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 MATN3O15232 486 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 CYP7B1O75881 506 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 CCNCP24863 283 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 CSKP41240 450 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 GRIA1P42261 906 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 DGKGP49619 791 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 CPSF6Q16630 551 aaKnown RBP eCLIP13.77□□□□□ -0.2
SMC6-201ENST00000351948 TCHHL1Q5QJ38 904 aaPredicted RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 ZNF398Q8TD17 642 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 VPS45Q9NRW7 570 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 TAGLN3Q9UI15 199 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 PIRO00625 290 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 BEST1O76090 585 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 METTL18O95568 372 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 NDST3O95803 873 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 MAPK1P28482 360 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 PLOD1Q02809 727 aaPredicted RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 NAB1Q13506 487 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 FASTKQ14296 549 aaKnown RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 RCN1Q15293 331 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 DCAF12L1Q5VU92 463 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 SNX32Q86XE0 403 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 NKAPQ8N5F7 415 aaKnown RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 NRBF2Q96F24 287 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 DNAJC1Q96KC8 554 aaKnown RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 TEX12Q9BXU0 123 aa13.77□□□□□ -0.2
SMC6-201ENST00000351948 IMP3Q9NV31 184 aaKnown RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 URB1O60287 2271 aaKnown RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 COL2A1P02458 1487 aaPredicted RBP13.77□□□□□ -0.2
SMC6-201ENST00000351948 SULT2A1Q06520 285 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 DMC1Q14565 340 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 ITIH4Q14624 930 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 PXYLP1Q8TE99 480 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 SNAP91O60641 907 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 PDE5AO76074 875 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 AP2A1O95782 977 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 NMBRP28336 390 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 TNFRSF8P28908 595 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 INPP1P49441 399 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 OXCT2Q9BYC2 517 aaPredicted RBP13.77□□□□□ -0.21
SMC6-201ENST00000351948 RMND5AQ9H871 391 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 SNX13Q9Y5W8 968 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 TMEM114B3SHH9 223 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 CDK14O94921 469 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 PITX1P78337 314 aaPredicted RBP13.77□□□□□ -0.21
SMC6-201ENST00000351948 CAP1Q01518 475 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 ENPEPQ07075 957 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 CNTN1Q12860 1018 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 UPP1Q16831 310 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 C10orf107Q8IVU9 208 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 CMTM8Q8IZV2 173 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 BORCS6Q96GS4 357 aa13.77□□□□□ -0.21
SMC6-201ENST00000351948 IGKV6D-21A0A0A0MT36 114 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 C2P06681 752 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 AMD1P17707 334 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 PIK3CGP48736 1102 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 ACSM2AQ08AH3 577 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 RNASEH2BQ5TBB1 312 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 ACSM2BQ68CK6 577 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SCUBE1Q8IWY4 988 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 GPR156Q8NFN8 814 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 LMO3Q8TAP4 145 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 SEZ6LQ9BYH1 1024 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 H3BMM5 538 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 FGF19O95750 216 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 ACVRL1P37023 503 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 CDK7P50613 346 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 RPL14P50914 215 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■■□ 21.8
SMC6-201ENST00000351948 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
SMC6-201ENST00000351948 CYB5D2Q8WUJ1 264 aa13.76□□□□□ -0.21
SMC6-201ENST00000351948 KLHL32Q96NJ5 620 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms