RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 RALGDSQ12967 914 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 IHHQ14623 411 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 CFAP58Q5T655 872 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 ERMP1Q7Z2K6 904 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 RNF10Q8N5U6 811 aaKnown RBP22.26■■□□□ 1.15
SNX3-202ENST00000349379 CCNYQ8ND76 341 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 ARRDC2Q8TBH0 407 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 MYOCQ99972 504 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 SEMA3CQ99985 751 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 GPR27Q9NS67 375 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 PCDHGC4Q9Y5F7 938 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 ARID1BQ8NFD5 2236 aaPredicted RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 CFAP69A5D8W1 941 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 H0Y8X5 98 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 MAGEC1O60732 1142 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 MMP20O60882 483 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 PECAM1P16284 738 aaPredicted RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 XPAP23025 273 aaPredicted RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 CES1P23141 567 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 PTPN7P35236 360 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 POLR2LP62875 67 aaKnown RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 ZBTB17Q13105 803 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 LLGL1Q15334 1064 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 KAZNQ674X7 775 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 ERAP2Q6P179 960 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 KYAT3Q6YP21 454 aaKnown RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 DBX2Q6ZNG2 339 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 BBS12Q6ZW61 710 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 BZW1Q7L1Q6 419 aaKnown RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 SPATS2Q86XZ4 545 aaKnown RBP22.25■■□□□ 1.15
SNX3-202ENST00000349379 SYCE1Q8N0S2 351 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 CNTD1Q8N815 330 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 FAM174AQ8TBP5 190 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 CXorf40AQ8TE69 158 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 ALG3Q92685 438 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 BMFQ96LC9 184 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 ERVMER34-1Q9H9K5 563 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 GDF3Q9NR23 364 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 TM7SF3Q9NS93 570 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 EFR3BQ9Y2G0 817 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 PCDHGB2Q9Y5G2 931 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 CAPN6Q9Y6Q1 641 aa22.25■■□□□ 1.15
SNX3-202ENST00000349379 A0A1B0GTQ1 180 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 GOLGA6L3A6NEY3 463 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 KCNK1O00180 336 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 FZD6O60353 706 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 DFNA5O60443 496 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 TM7SF2O76062 418 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 PRKCGP05129 697 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 DSC2Q02487 901 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 AGERQ15109 404 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 PRKD1Q15139 912 aaPredicted RBP22.24■■□□□ 1.15
SNX3-202ENST00000349379 ZNF662Q6ZS27 426 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 CCDC50Q8IVM0 306 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 CENPTQ96BT3 561 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 ELF4Q99607 663 aaPredicted RBP22.24■■□□□ 1.15
SNX3-202ENST00000349379 HERPUD2Q9BSE4 406 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 WRAP53Q9BUR4 548 aaKnown RBP22.24■■□□□ 1.15
SNX3-202ENST00000349379 TSGA10Q9BZW7 698 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 HAUS2Q9NVX0 235 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 SAE1Q9UBE0 346 aaPredicted RBP22.24■■□□□ 1.15
SNX3-202ENST00000349379 AMFRQ9UKV5 643 aa22.24■■□□□ 1.15
SNX3-202ENST00000349379 LRP4O75096 1905 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 COL5A1P20908 1838 aaPredicted RBP22.23■■□□□ 1.15
SNX3-202ENST00000349379 KCNK3O14649 394 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 PGLSO95336 258 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 JCHAINP01591 159 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 RWDD2BP57060 319 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 CLDN2P57739 230 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 NIPAL4Q0D2K0 466 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 AP1B1Q10567 949 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 SGCGQ13326 291 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 SHBQ15464 509 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 DPPA4Q7L190 304 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 PEX26Q7Z412 305 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 TP53I13Q8NBR0 393 aaPredicted RBP22.23■■□□□ 1.15
SNX3-202ENST00000349379 KLHDC7BQ96G42 594 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 PPIL1Q9Y3C6 166 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 PCDHB9Q9Y5E1 797 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 RAI2Q9Y5P3 530 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 SPTBN2O15020 2390 aa22.23■■□□□ 1.15
SNX3-202ENST00000349379 POM121BA6NF01 834 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 A6NNZ2 444 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 MIF4GDA9UHW6 222 aaKnown RBP22.22■■□□□ 1.15
SNX3-202ENST00000349379 PCDHGA12O60330 932 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 KCNK5O95279 499 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 CPP00450 1065 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 THEGLP0DJG4 465 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 C6P13671 934 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 RXRGP48443 463 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 CCT8P50990 548 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 ITKQ08881 620 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 OR13H1Q8NG92 308 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 PIH1D2Q8WWB5 315 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 MCCC1Q96RQ3 725 aaPredicted RBP22.22■■□□□ 1.15
SNX3-202ENST00000349379 PHTF1Q9UMS5 762 aa22.22■■□□□ 1.15
SNX3-202ENST00000349379 APOC4-APOC2K7ER74 178 aa22.21■■□□□ 1.15
SNX3-202ENST00000349379 DDX3YO15523 660 aaKnown RBP22.21■■□□□ 1.15
SNX3-202ENST00000349379 KRT86O43790 486 aa22.21■■□□□ 1.15
SNX3-202ENST00000349379 APOC2P02655 101 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms