RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 EPHB1P54762 984 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 RPL26P61254 145 aaKnown RBP18.78■□□□□ 0.6
PTN-201ENST00000348225 PRAMEP78395 509 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 PDE1BQ01064 536 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 DGKKQ5KSL6 1271 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 GLT6D1Q7Z4J2 308 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 ADIPOR2Q86V24 386 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 TAX1BP1Q86VP1 789 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 RYBPQ8N488 228 aaPredicted RBP18.78■□□□□ 0.6
PTN-201ENST00000348225 ACMSDQ8TDX5 336 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 STYXQ8WUJ0 223 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 IQCGQ9H095 443 aaKnown RBP18.78■□□□□ 0.6
PTN-201ENST00000348225 TNKS2Q9H2K2 1166 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 CCDC134Q9H6E4 229 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 MKS1Q9NXB0 559 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 HACD3Q9P035 362 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 CDH22Q9UJ99 828 aa18.78■□□□□ 0.6
PTN-201ENST00000348225 RPL26L1Q9UNX3 145 aaKnown RBP18.78■□□□□ 0.6
PTN-201ENST00000348225 MYO9BQ13459 2157 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 KIF26AQ9ULI4 1882 aaPredicted RBP18.77■□□□□ 0.6
PTN-201ENST00000348225 C2orf81A6NN90 581 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 COPEO14579 308 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 PGLSO95336 258 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 FCARP24071 287 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 SERPINA4P29622 427 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 RPA3P35244 121 aaPredicted RBP18.77■□□□□ 0.6
PTN-201ENST00000348225 NNMTP40261 264 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 HADHAP40939 763 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 IL9RQ01113 521 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 ACVR1Q04771 509 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 LRRC14Q15048 493 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 TAF1AQ15573 450 aaPredicted RBP18.77■□□□□ 0.6
PTN-201ENST00000348225 QPCTQ16769 361 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 ACCSLQ4AC99 568 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 NEPROQ6NW34 567 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 CHRDL2Q6WN34 429 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 KIAA0408Q6ZU52 694 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 SH2D5Q6ZV89 423 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 PAF1Q8N7H5 531 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 ASIC4Q96FT7 647 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 TUBGCP5Q96RT8 1024 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 EPN3Q9H201 632 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 MFSD1Q9H3U5 465 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 PCDHB9Q9Y5E1 797 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 ARL5AQ9Y689 179 aa18.77■□□□□ 0.6
PTN-201ENST00000348225 ZNF821O75541 412 aaPredicted RBP18.76■□□□□ 0.59
PTN-201ENST00000348225 RPP40O75818 363 aaKnown RBP18.76■□□□□ 0.59
PTN-201ENST00000348225 ASLP04424 464 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 PRKCGP05129 697 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 PIRTP0C851 137 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 SERPINB8P50452 374 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 RAD51Q06609 339 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 GRM3Q14832 879 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 ZNF470Q6ECI4 717 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 OR6P1Q8NGX9 317 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 OR6K2Q8NGY2 324 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 DENND1AQ8TEH3 1009 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 RHOJQ9H4E5 214 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 EBF3Q9H4W6 596 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 CLEC1BQ9P126 229 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 SLC8A2Q9UPR5 921 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 ERVW-1Q9UQF0 538 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 SLC27A6Q9Y2P4 619 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 SPO11Q9Y5K1 396 aa18.76■□□□□ 0.59
PTN-201ENST00000348225 TPP1O14773 563 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 HTRA2O43464 458 aaPredicted RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 ATP5BP06576 529 aaKnown RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 CISD3P0C7P0 127 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 ARSAP15289 507 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 SLC1A2P43004 574 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 ILF2Q12905 390 aaKnown RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 DLG2Q15700 870 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 GEN1Q17RS7 908 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 MYLK3Q32MK0 819 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 CARD16Q5EG05 197 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 HHATQ5VTY9 493 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 TANGO2Q6ICL3 276 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 CAMK1DQ8IU85 385 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 YAF2Q8IY57 180 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 OTUD6BQ8N6M0 293 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 C2CD4AQ8NCU7 369 aaPredicted RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 TCP10LQ8TDR4 215 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 HDAC10Q969S8 669 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 VPS39Q96JC1 886 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 ZFYVE19Q96K21 471 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 DNAJC1Q96KC8 554 aaKnown RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 SRPK1Q96SB4 655 aaKnown RBP18.75■□□□□ 0.59
PTN-201ENST00000348225 FAM83CQ9BQN1 747 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 MCMBPQ9BTE3 642 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 MLXIPLQ9NP71 852 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 PCMTD2Q9NV79 361 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 GGT7Q9UJ14 662 aa18.75■□□□□ 0.59
PTN-201ENST00000348225 GMNCA6NCL1 334 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 PIGNO95427 931 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 ASMTLO95671 621 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 SRPRAP08240 638 aaKnown RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 MTHFRP42898 656 aa18.74■□□□□ 0.59
PTN-201ENST00000348225 RECQLP46063 649 aaPredicted RBP18.74■□□□□ 0.59
PTN-201ENST00000348225 CCT5P48643 541 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms