RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NAB1Q13506 487 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SLC12A1Q13621 1099 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FRG1Q14331 258 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 GALNT3Q14435 633 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 GPNMBQ14956 572 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TAF1CQ15572 869 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 OR4D1Q15615 310 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 KCNA10Q16322 511 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CNPY1Q3B7I2 92 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SIRPB2Q5JXA9 342 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 OGFRL1Q5TC84 451 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 OVOS1Q6IE37 1185 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CCSAPQ6IQ19 270 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ISCA2Q86U28 154 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF598Q86UK7 904 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 RASAL3Q86YV0 1011 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ATPAF2Q8N5M1 289 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 HDAC10Q969S8 669 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SLC39A13Q96H72 371 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CNDP1Q96KN2 507 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 UBXN10Q96LJ8 280 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TBATAQ96M53 351 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SLC29A1Q99808 456 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FERMT1Q9BQL6 677 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 DMAP1Q9NPF5 467 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 GMIPQ9P107 970 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 EVLQ9UI08 416 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 IPO11Q9UI26 975 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ACOT9Q9Y305 439 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 PTCH2Q9Y6C5 1203 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 WDFY3Q8IZQ1 3526 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ZFC3H1O60293 1989 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 A0A0U1RQF3 1178 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 RGSL1A5PLK6 1076 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM114B3SHH9 223 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 NT5C1B-RDH14C9J2C7 533 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CASQ2O14958 399 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TIMM44O43615 452 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 PEX1O43933 1283 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CIB2O75838 187 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 S1PR4O95977 384 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SKIP12755 728 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MTHFD2P13995 350 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ELNP15502 786 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ALDH1A3P47895 512 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CDK7P50613 346 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 KCNQ1P51787 676 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 HUNKP57058 714 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 LRP8Q14114 963 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 GRB7Q14451 532 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 PCBP1Q15365 356 aaKnown RBP eCLIP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TRIM71Q2Q1W2 868 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 C6orf10Q5SRN2 563 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FBXL22Q6P050 247 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MIB1Q86YT6 1006 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM86AQ8N2M4 240 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CMTM5Q96DZ9 223 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ANKRD27Q96NW4 1050 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 AP5M1Q9H0R1 490 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SMOC2Q9H3U7 446 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ALG9Q9H6U8 611 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ZDHHC7Q9NXF8 308 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CCDC167Q9P0B6 97 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ZNF225Q9UK10 706 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ARHGAP26Q9UNA1 814 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SORCS3Q9UPU3 1222 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CDY1Q9Y6F8 540 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CROCCQ5TZA2 2017 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 XPOTO43592 962 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 KIF1CO43896 1103 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SMIM24O75264 130 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CABYRO75952 493 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 LUC7L3O95232 432 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 TFAP2AP05549 437 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 UQCRBP14927 111 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CPB1P15086 417 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 STMN1P16949 149 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DESP17661 470 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CDC42EP1Q00587 391 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 POLD3Q15054 466 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DBN1Q16643 649 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 ARL13BQ3SXY8 428 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 RAP1GAP2Q684P5 730 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 NEPROQ6NW34 567 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CYP2R1Q6VVX0 501 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 LMNTD2Q8IXW0 634 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GALNT4Q8N4A0 578 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 RTL3Q8N8U3 475 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DCBLD1Q8N8Z6 715 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 PABPC5Q96DU9 382 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 IMP4Q96G21 291 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 DCUN1D1Q96GG9 259 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 EXOC2Q96KP1 924 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 GPR62Q9BZJ7 368 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 KLHL4Q9C0H6 718 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 STN1Q9H668 368 aaKnown RBP6.07□□□□□ -1.44
CLCN3-201ENST00000347613 CCSER2Q9H7U1 834 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 WDR41Q9HAD4 459 aa6.07□□□□□ -1.44
CLCN3-201ENST00000347613 SLAMF8Q9P0V8 285 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms