RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 VPS26BQ4G0F5 336 aa15.44■□□□□ 0.06
LMNA-201ENST00000347559 PMF1Q6P1K2 205 aa15.44■□□□□ 0.06
LMNA-201ENST00000347559 ZNF641Q96N77 438 aaPredicted RBP15.44■□□□□ 0.06
LMNA-201ENST00000347559 CLEC6AQ6EIG7 209 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 XAF1Q6GPH4 301 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 COLGALT2Q8IYK4 626 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 TXNDC5Q8NBS9 432 aaKnown RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 RDH11Q8TC12 318 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SLC45A3Q96JT2 553 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 C1QTNF1Q9BXJ1 281 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 MRPL4Q9BYD3 311 aaKnown RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 WDR12Q9GZL7 423 aaKnown RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 DEFB129Q9H1M3 183 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 GPN2Q9H9Y4 310 aaPredicted RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.43■□□□□ 0.063e-8■■□□□ 12.4
LMNA-201ENST00000347559 ACOT9Q9Y305 439 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SPO11Q9Y5K1 396 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 RAD54BQ9Y620 910 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 MDM4O15151 490 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 CILPO75339 1184 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SLC35E2BP0CK96 405 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 MAGP20916 626 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 CCND2P30279 289 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SHMT2P34897 504 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 ARL4AP40617 200 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 NDST1P52848 882 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 GOLGA7BQ2TAP0 167 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 TBPL2Q6SJ96 375 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 R3HCC1LQ7Z5L2 792 aaKnown RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 FAM131BQ86XD5 332 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 CENPLQ8N0S6 344 aaPredicted RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 MAELQ96JY0 434 aaKnown RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 TSPAN18Q96SJ8 248 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 OSBPL2Q9H1P3 480 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 TP63Q9H3D4 680 aaPredicted RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 TMPRSS4Q9NRS4 437 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SARDHQ9UL12 918 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 MTF2Q9Y483 593 aaPredicted RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 PCDHGA3Q9Y5H0 932 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 TGM1P22735 817 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 MZF1P28698 734 aaPredicted RBP15.43■□□□□ 0.06
LMNA-201ENST00000347559 ARL2P36404 184 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 STX1BP61266 288 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 NDUFA5Q16718 116 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 TSTD2Q5T7W7 516 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 ATAD3BQ5T9A4 648 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 ZNF280DQ6N043 979 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 ADGRG5Q8IZF4 528 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 CLEC4CQ8WTT0 213 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 DNAI2Q9GZS0 605 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 GIMAP2Q9UG22 337 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 ARID2Q68CP9 1835 aa15.43■□□□□ 0.06
LMNA-201ENST00000347559 NFICP08651 508 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 VDRP11473 427 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 GJA9P57773 515 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 FPGSQ05932 587 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 SLC12A1Q13621 1099 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 FUT11Q495W5 492 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 DACT2Q5SW24 774 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 ABHD15Q6UXT9 468 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 PLEKHG7Q6ZR37 379 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 PODNQ7Z5L7 613 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 TRPV3Q8NET8 790 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 SLC7A14Q8TBB6 771 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 PHF21BQ96EK2 531 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 EPS8L2Q9H6S3 715 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 LTB4R2Q9NPC1 389 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 GDAP2Q9NXN4 497 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 CPSF3Q9UKF6 684 aaKnown RBP15.42■□□□□ 0.06
LMNA-201ENST00000347559 BAG5Q9UL15 447 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 SYNPO2Q9UMS6 1093 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
LMNA-201ENST00000347559 IFT52Q9Y366 437 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 PTGES3LE9PB15 166 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 EIF3FO00303 357 aaPredicted RBP15.42■□□□□ 0.06
LMNA-201ENST00000347559 ARPC2O15144 300 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 GUCY1B2O75343 617 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 HTR1BP28222 390 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 NMBRP28336 390 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 IFITM2Q01629 132 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 FAM45BPQ6NSW5 357 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 SPRED1Q7Z699 444 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 AKAP14Q86UN6 197 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 ITIH5Q86UX2 942 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 VSIG10LQ86VR7 867 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 C1orf127Q8N9H9 656 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 FAM45AQ8TCE6 357 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 GBA2Q9HCG7 927 aaPredicted RBP15.42■□□□□ 0.06
LMNA-201ENST00000347559 ZNF302Q9NR11 478 aa15.42■□□□□ 0.06
LMNA-201ENST00000347559 AQP12BA6NM10 295 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 NOTOA8MTQ0 251 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 M0R3G1 203 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 ABCB7O75027 752 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 RGS20O76081 388 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 NADKO95544 446 aaPredicted RBP15.41■□□□□ 0.06
LMNA-201ENST00000347559 CTBP1Q13363 440 aa15.41■□□□□ 0.06
LMNA-201ENST00000347559 DPYSL2Q16555 572 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms