RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PIK3R3Q92569 461 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 WDR18Q9BV38 432 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 YTHDF1Q9BYJ9 559 aaKnown RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 ASS1P00966 412 aaKnown RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 MED22Q15528 200 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 CMPK2Q5EBM0 449 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 METTL7BQ6UX53 244 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 C11orf96Q7Z7L8 435 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 TDRD1Q9BXT4 1180 aaKnown RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 LHX5Q9H2C1 402 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 IFT80Q9P2H3 777 aaPredicted RBP18.16■□□□□ 0.5
SMC4-201ENST00000344722 CLCA2Q9UQC9 943 aa18.16■□□□□ 0.5
SMC4-201ENST00000344722 FAM149AA5PLN7 773 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 RAMP2O60895 175 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 NDUFS2O75306 463 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 TULP3O75386 442 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 DSG3P32926 999 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 ATP12AP54707 1039 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 DLG1Q12959 904 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 GLT6D1Q7Z4J2 308 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 UNC93AQ86WB7 457 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 STK40Q8N2I9 435 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 PCDH18Q9HCL0 1135 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 ADGRE2Q9UHX3 823 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 PAPSS1O43252 624 aaPredicted RBP18.15■□□□□ 0.5
SMC4-201ENST00000344722 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 TSPAN8P19075 237 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 MIB1Q86YT6 1006 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 PACRGLQ8N7B6 248 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 ZNF781Q8N8C0 355 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 SMYD1Q8NB12 490 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 LGMNQ99538 433 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 FAM126AQ9BYI3 521 aaPredicted RBP18.15■□□□□ 0.5
SMC4-201ENST00000344722 QTRT2Q9H974 415 aaKnown RBP18.15■□□□□ 0.5
SMC4-201ENST00000344722 KLQ9UEF7 1012 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 SNX7Q9UNH6 387 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 FGF10O15520 208 aaPredicted RBP18.15■□□□□ 0.5
SMC4-201ENST00000344722 ANGPTL1O95841 491 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 CYP4B1P13584 511 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 CDK18Q07002 472 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 SPATA6LQ8N4H0 392 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 MKL1Q969V6 931 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 YME1L1Q96TA2 773 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 TKTL2Q9H0I9 626 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 HIPK3Q9H422 1215 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 VTNP04004 478 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 CLTBP09497 229 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 CYP2C18P33260 490 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 CAMK2GQ13555 558 aaPredicted RBP18.15■□□□□ 0.5
SMC4-201ENST00000344722 FBXO5Q9UKT4 447 aa18.15■□□□□ 0.5
SMC4-201ENST00000344722 PDLIM1O00151 329 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 DNAJA2O60884 412 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 SLC7A1P30825 629 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 CDH18Q13634 790 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 ARL13AQ5H913 290 aaPredicted RBP18.14■□□□□ 0.5
SMC4-201ENST00000344722 UNC5BQ8IZJ1 945 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 DNERQ8NFT8 737 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 CRISPLD1Q9H336 500 aa18.14■□□□□ 0.5
SMC4-201ENST00000344722 SAMD4AQ9UPU9 718 aaKnown RBP18.14■□□□□ 0.5
SMC4-201ENST00000344722 KLF11O14901 512 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 GPR15P49685 360 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 HERC3Q15034 1050 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 ZNF829Q3KNS6 432 aaPredicted RBP18.14■□□□□ 0.49
SMC4-201ENST00000344722 DCAF12L1Q5VU92 463 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 FRMD7Q6ZUT3 714 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 CDK20Q8IZL9 346 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 PIK3C3Q8NEB9 887 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 JOSD2Q8TAC2 188 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 SIX2Q9NPC8 291 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 AHSPQ9NZD4 102 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 FAM50BQ9Y247 325 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 ITM2BQ9Y287 266 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 GOT1P17174 413 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 ATP6V0D1P61421 351 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 IFRD1O00458 451 aaPredicted RBP18.14■□□□□ 0.49
SMC4-201ENST00000344722 FANCGO15287 622 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 IGFBP5P24593 272 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 MAGEA8P43361 318 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 MTA1Q13330 715 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 CTBP1Q13363 440 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 TIGD2Q4W5G0 525 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 LLGL2Q6P1M3 1020 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 ZNF410Q86VK4 478 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 SVOPLQ8N434 492 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 ADAM32Q8TC27 787 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 NELL1Q92832 810 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 FBXO32Q969P5 355 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 EBF4Q9BQW3 602 aa18.14■□□□□ 0.49
SMC4-201ENST00000344722 NOCTQ9UK39 431 aaKnown RBP18.14■□□□□ 0.49
SMC4-201ENST00000344722 UBE2QL1A1L167 161 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
SMC4-201ENST00000344722 DHFRP00374 187 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 RHOCP08134 193 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 ITGAXP20702 1163 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 SCN1BQ07699 218 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 EFEMP1Q12805 493 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 FSTL1Q12841 308 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 MERTKQ12866 999 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 MCOLN3Q8TDD5 553 aa18.13■□□□□ 0.49
SMC4-201ENST00000344722 REPS1Q96D71 796 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms