RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 UBOX5O94941 541 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SERPINF2P08697 491 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SRP9P49458 86 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RPS8P62241 208 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TCEAL1Q15170 157 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CLNKQ7Z7G1 428 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 OR7G3Q8NG95 312 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CDCA7Q9BWT1 371 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GRXCR2A6NFK2 248 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AGAP5A6NIR3 686 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CAPN14A8MX76 684 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TGFBIQ15582 683 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM44Q2T9K0 475 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ODR4Q5SWX8 454 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 USP43Q70EL4 1123 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM139Q8IV31 216 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ASIC4Q96FT7 647 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TXN2Q99757 166 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LRRC40Q9H9A6 602 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PCDH12Q9NPG4 1184 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PALD1Q9ULE6 856 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ATP7AQ04656 1500 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 A0A0B4J203 849 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 MAPK3P27361 379 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PMLP29590 882 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KLHL26Q53HC5 615 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 DNM1P34Q6PK57 102 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FIP1L1Q6UN15 594 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC41A3Q96GZ6 507 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 DCTN4Q9UJW0 460 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF330Q9Y3S2 320 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 F10P00742 488 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GRIA2P42262 883 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ALDH6A1Q02252 535 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FAM69CQ0P6D2 419 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FAM228AQ86W67 206 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ANKRA2Q9H9E1 313 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ACEP12821 1306 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FLT1P17948 1338 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LRRC53A6NM62 1247 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SULT1C2O00338 296 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PROM1O43490 865 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RPLP0P05388 317 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ARSKQ6UWY0 536 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TRPV3Q8NET8 790 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 DSN1Q9H410 356 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TOR4AQ9NXH8 423 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LRP2BPQ9P2M1 347 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RTTNQ86VV8 2226 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AK9Q5TCS8 1911 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 F6X3S4 739 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LDLRP01130 860 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CCNE1P24864 410 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TXNL4AP83876 142 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 UAP1L1Q3KQV9 507 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 HACD4Q5VWC8 232 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ENOSF1Q7L5Y1 443 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 IFNL3Q8IZI9 196 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RASGEF1AQ8N9B8 481 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SUN3Q8TAQ9 357 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 BARD1Q99728 777 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 UGT2B28Q9BY64 529 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 NT5DC2Q9H857 520 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ARMT1Q9H993 441 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CD274Q9NZQ7 290 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RAB3DO95716 219 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AOC1P19801 751 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PTENP60484 403 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FSTL5Q8N475 847 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 NAT16Q8N8M0 369 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 DNAAF1Q8NEP3 725 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CPNE4Q96A23 557 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RCN3Q96D15 328 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF486Q96H40 463 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 WFIKKN1Q96NZ8 548 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 BHLHE41Q9C0J9 482 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KANTRA0A1W2PQU2 76 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF200P98182 395 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 C11orf65Q8NCR3 313 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GTPBP3Q969Y2 492 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CORO2BQ9UQ03 480 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 A0A1B0GVI7 797 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SNRPAP09012 282 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FGL1Q08830 312 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AFMIDQ63HM1 303 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SEL1L3Q68CR1 1132 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 HAGHLQ6PII5 290 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 XAGE3Q8WTP9 111 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC39A7Q92504 469 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GKN1Q9NS71 199 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TOP2BQ02880 1626 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KBTBD13C9JR72 458 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 XRCC1P18887 633 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TCN1P20061 433 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PTPREP23469 700 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 MAPK8P45983 427 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 OR3A3P47888 321 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TGM4P49221 684 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms