RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 C12orf65Q9H3J6 166 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 QTRT2Q9H974 415 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MYPNQ86TC9 1320 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DNAJB5O75953 348 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 AP2A1O95782 977 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 THP07101 528 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 AXLP30530 894 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TUBA1BP68363 451 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SEMA5AQ13591 1074 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DEFB106AQ8N104 65 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 QKIQ96PU8 341 aaKnown RBP eCLIP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TSPAN18Q96SJ8 248 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 LGMNQ99538 433 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RIBC2Q9H4K1 309 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ATP6AP2A0A1C7CYW4 349 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MYL12BO14950 172 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MAFO75444 373 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ATP6AP2O75787 350 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NTRK1P04629 796 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NPR3P17342 541 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HOXD13P35453 343 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SOAT1P35610 550 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HIST2H2ACQ16777 129 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HIST2H2AA3Q6FI13 130 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ARMCX6Q7L4S7 300 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 GLT6D1Q7Z4J2 308 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NKAPQ8N5F7 415 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MCFD2Q8NI22 146 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FBXO30Q8TB52 745 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PLEKHO2Q8TD55 490 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UTP15Q8TED0 518 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TPD52L3Q96J77 140 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TDRD1Q9BXT4 1180 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TLE6Q9H808 572 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF408Q9H9D4 720 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 A0A087WZ62 844 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RGS10O43665 173 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TSC22D2O75157 780 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SLC22A3O75751 556 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 EPN2O95208 641 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NADKO95544 446 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NPPAP01160 153 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HNRNPLP14866 589 aaKnown RBP eCLIP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 GLUD2P49448 558 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UBE3AQ05086 875 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FSTL1Q12841 308 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SMYD5Q6GMV2 418 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CBR4Q8N4T8 237 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CPSF7Q8N684 471 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SPPL2AQ8TCT8 520 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 POLR1EQ9GZS1 481 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ALG9Q9H6U8 611 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CLN6Q9NWW5 311 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ADGRE2Q9UHX3 823 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DERAQ9Y315 318 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SNED1Q8TER0 1413 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 WARSP23381 471 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CPT1AP50416 773 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 POLR2JP52435 117 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ARPP19P56211 112 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 EPGNQ6UW88 154 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RAB42Q8N4Z0 105 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 OR5B17Q8NGF7 314 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 KCTD4Q8WVF5 259 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CENPIQ92674 756 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 REXO5Q96IC2 774 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RPRD1BQ9NQG5 326 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CCDC59Q9P031 241 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PDE10AQ9Y233 779 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 A0A088AWK7 358 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FBP2O00757 339 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CCNE2O96020 404 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 VTNP04004 478 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT2B4P06133 528 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 YBX3P16989 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 GDF10P55107 478 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TYW3Q6IPR3 259 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MZT2AQ6P582 158 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FRMD7Q6ZUT3 714 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SHISA4Q96DD7 197 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NT5MQ9NPB1 228 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 WTIPA6NIX2 430 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 E7ESA3 106 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A9O60656 530 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CAPN15O75808 1086 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A6P19224 532 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A1P22309 533 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A4P22310 534 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A3P35503 534 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UGT1A5P35504 534 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TMEM62Q0P6H9 643 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SGO1Q5FBB7 561 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PPM1JQ5JR12 505 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FAM182BQ5T319 152 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MBLAC2Q68D91 279 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms