RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SLC6A18Q96N87 628 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 TUBGCP5Q96RT8 1024 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 APOL2Q9BQE5 337 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SNX12Q9UMY4 172 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 METTL12A8MUP2 240 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ZSCAN5DPP0CG00 497 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 CSNK1DP48730 415 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 XRCC4Q13426 336 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ANKRD20A2Q5SQ80 823 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ANKRD20A1Q5TYW2 823 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ANKRD20A3Q5VUR7 823 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 LAIR1Q6GTX8 287 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ERAP2Q6P179 960 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 TSPAN33Q86UF1 283 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SLC25A41Q8N5S1 370 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 GLIS1Q8NBF1 620 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 RMDN1Q96DB5 314 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 FAM122AQ96E09 287 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ZC3H10Q96K80 434 aaKnown RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF641Q96N77 438 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 AASDHPPTQ9NRN7 309 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
TUBD1-202ENST00000340993 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
TUBD1-202ENST00000340993 H0Y8X5 98 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 STK10O94804 968 aaKnown RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 PGLSO95336 258 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 PAK4O96013 591 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 MAPK8P45983 427 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 VPS41P49754 854 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 CLDN2P57739 230 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 GRM3Q14832 879 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 BRAT1Q6PJG6 821 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 GSTA5Q7RTV2 222 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 ALYREFQ86V81 257 aaKnown RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 OR2I1PQ8NGU4 316 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 SLC35B2Q8TB61 432 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 FOXJ1Q92949 421 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 IMP4Q96G21 291 aaKnown RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 SERAC1Q96JX3 654 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 PBKQ96KB5 322 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 TDRD1Q9BXT4 1180 aaKnown RBP13.29□□□□□ -0.28
TUBD1-202ENST00000340993 USP29Q9HBJ7 922 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 PARD6AQ9NPB6 346 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 MYLKQ15746 1914 aa13.29□□□□□ -0.28
TUBD1-202ENST00000340993 BPTFQ12830 3046 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 BCLAF3A2AJT9 711 aaKnown RBP13.28□□□□□ -0.28
TUBD1-202ENST00000340993 GOLGA6CA6NDK9 693 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 GOLGA6BA6NDN3 693 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 NPIPB15A6NHN6 443 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-202ENST00000340993 PGRMC1O00264 195 aaKnown RBP13.28□□□□□ -0.28
TUBD1-202ENST00000340993 SLC7A4O43246 635 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 USP12O75317 370 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 EPN2O95208 641 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 GOLGA6DP0CG33 693 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 CASQ1P31415 396 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 CHRNA4P43681 627 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
TUBD1-202ENST00000340993 FGL2Q14314 439 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 FATE1Q969F0 183 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 SPATA13Q96N96 652 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 FERMT1Q9BQL6 677 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 SLC25A51Q9H1U9 297 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 CAAP1Q9H8G2 361 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 GOLGA6AQ9NYA3 693 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 FNDC3AQ9Y2H6 1198 aaKnown RBP13.28□□□□□ -0.28
TUBD1-202ENST00000340993 ZKSCAN5Q9Y2L8 839 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 CACNA1EQ15878 2313 aa13.28□□□□□ -0.28
TUBD1-202ENST00000340993 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.28
TUBD1-202ENST00000340993 RAD51BO15315 384 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 MTSS1O43312 755 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 HTRA2O43464 458 aaPredicted RBP13.27□□□□□ -0.28
TUBD1-202ENST00000340993 SOCS5O75159 536 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 ELFN1P0C7U0 828 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 C6P13671 934 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 MMP12P39900 470 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 LIG3P49916 1009 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 ZNF284Q2VY69 593 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 TRIM61Q5EBN2 209 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 WDR45BQ5MNZ6 344 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 HORMAD1Q86X24 394 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 KIAA2013Q8IYS2 634 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 PRELID2Q8N945 189 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 ECHDC3Q96DC8 303 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 FEM1CQ96JP0 617 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 FICDQ9BVA6 458 aa13.27□□□□□ -0.28
TUBD1-202ENST00000340993 GTPBP2Q9BX10 602 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms