RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 SYN3O14994 580 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 RPS17P08708 135 aaKnown RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 EDNRBP24530 442 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 PIK3R1P27986 724 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 DNM2P50570 870 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 GALNT2Q10471 571 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 CENPPQ6IPU0 288 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 LYSMD3Q7Z3D4 306 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 NUDCD3Q8IVD9 361 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 DNAJC5GQ8N7S2 189 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 KIAA0895Q8NCT3 520 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 OR52H1Q8NGJ2 320 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 DDX1Q92499 740 aaKnown RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 P2RX5Q93086 422 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 TRIM62Q9BVG3 475 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 GLTPQ9NZD2 209 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 EIF2B4Q9UI10 523 aaKnown RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 PODXLO00592 558 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 GIPC1O14908 333 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 KCNN4O15554 427 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 GMDSO60547 372 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 FGGP02679 453 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 HOXC12P31275 282 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 ACOT2P49753 483 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 SLC29A2Q14542 456 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 ERAP2Q6P179 960 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 DYMQ7RTS9 669 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 SNX29P2Q8IUI4 249 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 EPS8L1Q8TE68 723 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 FMO2Q99518 471 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 INVSQ9Y283 1065 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 MED16Q9Y2X0 877 aa17.05■□□□□ 0.32
CDK11B-201ENST00000340677 NOC2LQ9Y3T9 749 aaKnown RBP17.05■□□□□ 0.32
CDK11B-201ENST00000340677 SPATA31C2B4DYI2 1134 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PPM1BO75688 479 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 EPOP01588 193 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 IFI30P13284 250 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 CYP2C18P33260 490 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 GRIK1P39086 918 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 OR1G1P47890 313 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 ERVK-8P63133 956 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 STXBP2Q15833 593 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 BRMS1LQ5PSV4 323 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 FAM26FQ5R3K3 315 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 SLC9A4Q6AI14 798 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 ATG14Q6ZNE5 492 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PRR23BQ6ZRT6 265 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 BNIPLQ7Z465 357 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 HAUS6Q7Z4H7 955 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 CDH24Q86UP0 819 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 CRYBG2Q8N1P7 616 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 DCUN1D1Q96GG9 259 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
CDK11B-201ENST00000340677 TMEM109Q9BVC6 243 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 RANBP3Q9H6Z4 567 aaPredicted RBP17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PNMA8BQ9ULN7 279 aaPredicted RBP17.04■□□□□ 0.32
CDK11B-201ENST00000340677 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PLXNB2O15031 1838 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 ARID2Q68CP9 1835 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PLXNA1Q9UIW2 1896 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 WDR64B1ANS9 1081 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 FABP1P07148 127 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PSMC6P62333 389 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PTPN11Q06124 597 aaPredicted RBP17.04■□□□□ 0.32
CDK11B-201ENST00000340677 BFSP1Q12934 665 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 SPA17Q15506 151 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 GTF2H4Q92759 462 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 AHCYL2Q96HN2 611 aaKnown RBP17.04■□□□□ 0.32
CDK11B-201ENST00000340677 ZNF221Q9UK13 617 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
CDK11B-201ENST00000340677 MYH9P35579 1960 aaKnown RBP17.03■□□□□ 0.32
CDK11B-201ENST00000340677 A0A1W2PRG6 482 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 OR6C74A6NCV1 312 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 ZNF623O75123 536 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 RFPL2O75678 378 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 PSKH1P11801 424 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 STARP49675 285 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 AKR1D1P51857 326 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 FRG1Q14331 258 aaKnown RBP17.03■□□□□ 0.32
CDK11B-201ENST00000340677 ZBED5Q49AG3 693 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 SETMARQ53H47 684 aaPredicted RBP17.03■□□□□ 0.32
CDK11B-201ENST00000340677 PIK3R6Q5UE93 754 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 DCUN1D2Q6PH85 259 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 RNF139Q8WU17 664 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 CLPTM1LQ96KA5 538 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 ZNF347Q96SE7 839 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 DDX28Q9NUL7 540 aaKnown RBP17.03■□□□□ 0.32
CDK11B-201ENST00000340677 CNOT11Q9UKZ1 510 aaKnown RBP17.03■□□□□ 0.32
CDK11B-201ENST00000340677 COPS3Q9UNS2 423 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 INPP5FQ9Y2H2 1132 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 DOCK5Q9H7D0 1870 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 A8MVJ9 347 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 C2CD2LO14523 706 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 EPHB6O15197 1021 aa17.03■□□□□ 0.32
CDK11B-201ENST00000340677 IL6P05231 212 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms